Update bundle dependencies.

4DNucleome · Jan 8, 2024 · b891392 · b891392
1 parent 41ffcfe
commit b891392
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Showing 4 changed files with 56 additions and 42 deletions.
diff --git a/requirements/constraints_py3.10.txt b/requirements/constraints_py3.10.txt
@@ -4,7 +4,7 @@
 #
 #    pip-compile --allow-unsafe --extra=pyinstaller --extra=pyqt5 --extra=pyqt6 --extra=pyside2 --extra=pyside6 --extra=test --output-file=requirements/constraints_py3.10.txt --strip-extras requirements/version_denylist.txt setup.cfg
 #
-alabaster==0.7.13
+alabaster==0.7.15
     # via sphinx
 altgraph==0.17.4
     # via pyinstaller
@@ -40,7 +40,7 @@ click==8.1.7
     #   typer
 cloudpickle==3.0.0
     # via dask
-comm==0.2.0
+comm==0.2.1
     # via ipykernel
 coverage==7.4.0
     # via PartSeg (setup.cfg)
@@ -123,7 +123,7 @@ jupyter-client==8.6.0
     # via
     #   ipykernel
     #   qtconsole
-jupyter-core==5.5.1
+jupyter-core==5.7.0
     # via
     #   ipykernel
     #   jupyter-client
@@ -140,7 +140,7 @@ local-migrator==0.1.9
     #   nme
 locket==1.0.0
     # via partd
-lxml==5.0.0
+lxml==5.0.1
     # via PartSeg (setup.cfg)
 magicgui==0.8.1
     # via
@@ -182,7 +182,7 @@ npe2==0.7.3
     # via
     #   -r requirements/version_denylist.txt
     #   napari
-numpy==1.26.2
+numpy==1.26.3
     # via
     #   PartSeg (setup.cfg)
     #   czifile
@@ -215,6 +215,7 @@ packaging==23.2
     #   local-migrator
     #   pooch
     #   pyinstaller
+    #   pyinstaller-hooks-contrib
     #   pytest
     #   qtconsole
     #   qtpy
@@ -236,7 +237,7 @@ partsegdata==0.10.0
     # via PartSeg (setup.cfg)
 pexpect==4.9.0
     # via ipython
-pillow==10.1.0
+pillow==10.2.0
     # via
     #   imageio
     #   napari
@@ -291,7 +292,7 @@ pygments==2.17.2
     #   superqt
 pyinstaller==6.3.0
     # via PartSeg (setup.cfg)
-pyinstaller-hooks-contrib==2023.11
+pyinstaller-hooks-contrib==2023.12
     # via pyinstaller
 pyopengl==3.1.7
     # via napari
@@ -369,7 +370,7 @@ qtpy==2.4.1
     #   qtawesome
     #   qtconsole
     #   superqt
-referencing==0.32.0
+referencing==0.32.1
     # via
     #   jsonschema
     #   jsonschema-specifications
@@ -467,7 +468,7 @@ tqdm==4.66.1
     # via napari
 traceback-with-variables==2.0.4
     # via PartSeg (setup.cfg)
-traitlets==5.14.0
+traitlets==5.14.1
     # via
     #   comm
     #   ipykernel
@@ -499,7 +500,7 @@ vispy==0.12.2
     #   PartSeg (setup.cfg)
     #   napari
     #   napari-svg
-wcwidth==0.2.12
+wcwidth==0.2.13
     # via prompt-toolkit
 wrapt==1.16.0
     # via napari
@@ -512,4 +513,6 @@ zipp==3.17.0
 
 # The following packages are considered to be unsafe in a requirements file:
 setuptools==69.0.3
-    # via pyinstaller
+    # via
+    #   pyinstaller
+    #   pyinstaller-hooks-contrib
diff --git a/requirements/constraints_py3.11.txt b/requirements/constraints_py3.11.txt
@@ -4,7 +4,7 @@
 #
 #    pip-compile --allow-unsafe --extra=pyinstaller --extra=pyqt5 --extra=pyqt6 --extra=pyside2 --extra=pyside6 --extra=test --output-file=requirements/constraints_py3.11.txt --strip-extras requirements/version_denylist.txt setup.cfg
 #
-alabaster==0.7.13
+alabaster==0.7.15
     # via sphinx
 altgraph==0.17.4
     # via pyinstaller
@@ -40,7 +40,7 @@ click==8.1.7
     #   typer
 cloudpickle==3.0.0
     # via dask
-comm==0.2.0
+comm==0.2.1
     # via ipykernel
 coverage==7.4.0
     # via PartSeg (setup.cfg)
@@ -119,7 +119,7 @@ jupyter-client==8.6.0
     # via
     #   ipykernel
     #   qtconsole
-jupyter-core==5.5.1
+jupyter-core==5.7.0
     # via
     #   ipykernel
     #   jupyter-client
@@ -136,7 +136,7 @@ local-migrator==0.1.9
     #   nme
 locket==1.0.0
     # via partd
-lxml==5.0.0
+lxml==5.0.1
     # via PartSeg (setup.cfg)
 magicgui==0.8.1
     # via
@@ -178,7 +178,7 @@ npe2==0.7.3
     # via
     #   -r requirements/version_denylist.txt
     #   napari
-numpy==1.26.2
+numpy==1.26.3
     # via
     #   PartSeg (setup.cfg)
     #   czifile
@@ -211,6 +211,7 @@ packaging==23.2
     #   local-migrator
     #   pooch
     #   pyinstaller
+    #   pyinstaller-hooks-contrib
     #   pytest
     #   qtconsole
     #   qtpy
@@ -232,7 +233,7 @@ partsegdata==0.10.0
     # via PartSeg (setup.cfg)
 pexpect==4.9.0
     # via ipython
-pillow==10.1.0
+pillow==10.2.0
     # via
     #   imageio
     #   napari
@@ -287,7 +288,7 @@ pygments==2.17.2
     #   superqt
 pyinstaller==6.3.0
     # via PartSeg (setup.cfg)
-pyinstaller-hooks-contrib==2023.11
+pyinstaller-hooks-contrib==2023.12
     # via pyinstaller
 pyopengl==3.1.7
     # via napari
@@ -365,7 +366,7 @@ qtpy==2.4.1
     #   qtawesome
     #   qtconsole
     #   superqt
-referencing==0.32.0
+referencing==0.32.1
     # via
     #   jsonschema
     #   jsonschema-specifications
@@ -457,7 +458,7 @@ tqdm==4.66.1
     # via napari
 traceback-with-variables==2.0.4
     # via PartSeg (setup.cfg)
-traitlets==5.14.0
+traitlets==5.14.1
     # via
     #   comm
     #   ipykernel
@@ -489,7 +490,7 @@ vispy==0.12.2
     #   PartSeg (setup.cfg)
     #   napari
     #   napari-svg
-wcwidth==0.2.12
+wcwidth==0.2.13
     # via prompt-toolkit
 wrapt==1.16.0
     # via napari
@@ -502,4 +503,6 @@ zipp==3.17.0
 
 # The following packages are considered to be unsafe in a requirements file:
 setuptools==69.0.3
-    # via pyinstaller
+    # via
+    #   pyinstaller
+    #   pyinstaller-hooks-contrib
diff --git a/requirements/constraints_py3.8.txt b/requirements/constraints_py3.8.txt
@@ -42,7 +42,7 @@ click==8.1.7
     #   typer
 cloudpickle==3.0.0
     # via dask
-comm==0.2.0
+comm==0.2.1
     # via ipykernel
 coverage==7.4.0
     # via PartSeg (setup.cfg)
@@ -99,6 +99,7 @@ importlib-metadata==7.0.1
     #   dask
     #   jupyter-client
     #   pyinstaller
+    #   pyinstaller-hooks-contrib
     #   sphinx
 importlib-resources==6.1.1
     # via
@@ -132,7 +133,7 @@ jupyter-client==8.6.0
     # via
     #   ipykernel
     #   qtconsole
-jupyter-core==5.5.1
+jupyter-core==5.7.0
     # via
     #   ipykernel
     #   jupyter-client
@@ -149,7 +150,7 @@ local-migrator==0.1.9
     #   nme
 locket==1.0.0
     # via partd
-lxml==5.0.0
+lxml==5.0.1
     # via PartSeg (setup.cfg)
 magicgui==0.8.1
     # via
@@ -225,6 +226,7 @@ packaging==23.2
     #   local-migrator
     #   pooch
     #   pyinstaller
+    #   pyinstaller-hooks-contrib
     #   pytest
     #   qtconsole
     #   qtpy
@@ -248,7 +250,7 @@ pexpect==4.9.0
     # via ipython
 pickleshare==0.7.5
     # via ipython
-pillow==10.1.0
+pillow==10.2.0
     # via
     #   imageio
     #   napari
@@ -305,7 +307,7 @@ pygments==2.17.2
     #   superqt
 pyinstaller==6.3.0
     # via PartSeg (setup.cfg)
-pyinstaller-hooks-contrib==2023.11
+pyinstaller-hooks-contrib==2023.12
     # via pyinstaller
 pyopengl==3.1.7
     # via napari
@@ -387,7 +389,7 @@ qtpy==2.4.1
     #   qtawesome
     #   qtconsole
     #   superqt
-referencing==0.32.0
+referencing==0.32.1
     # via
     #   jsonschema
     #   jsonschema-specifications
@@ -485,7 +487,7 @@ tqdm==4.66.1
     # via napari
 traceback-with-variables==2.0.4
     # via PartSeg (setup.cfg)
-traitlets==5.14.0
+traitlets==5.14.1
     # via
     #   comm
     #   ipykernel
@@ -518,7 +520,7 @@ vispy==0.12.2
     #   PartSeg (setup.cfg)
     #   napari
     #   napari-svg
-wcwidth==0.2.12
+wcwidth==0.2.13
     # via prompt-toolkit
 wrapt==1.16.0
     # via napari
@@ -533,4 +535,6 @@ zipp==3.17.0
 
 # The following packages are considered to be unsafe in a requirements file:
 setuptools==69.0.3
-    # via pyinstaller
+    # via
+    #   pyinstaller
+    #   pyinstaller-hooks-contrib