Jax export #10865
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name: Installation | |
on: [push, pull_request, merge_group, workflow_dispatch] | |
jobs: | |
archive: | |
name: Archive Install | |
runs-on: ubuntu-22.04 | |
strategy: | |
matrix: | |
python-version: ["3.11"] | |
steps: | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- uses: actions/checkout@v4 | |
- run: git fetch --prune --unshallow | |
- run: echo "AMICI_DIR=$(pwd)" >> $GITHUB_ENV | |
- name: Install apt dependencies | |
uses: ./.github/actions/install-apt-dependencies | |
- name: apt | |
run: | | |
sudo apt-get update \ | |
&& sudo apt-get install -y \ | |
cmake | |
- name: Build suitesparse | |
run: scripts/buildSuiteSparse.sh | |
- name: Build sundials | |
run: scripts/buildSundials.sh | |
- name: Build AMICI | |
run: scripts/buildAmici.sh | |
- name: Install python archive | |
run: scripts/installAmiciArchive.sh | |
sdist_ubuntu: | |
name: sdist Install Ubuntu | |
runs-on: ubuntu-22.04 | |
strategy: | |
matrix: | |
python-version: ["3.11"] | |
steps: | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- uses: actions/checkout@v4 | |
- run: git fetch --prune --unshallow | |
- run: echo "AMICI_DIR=$(pwd)" >> $GITHUB_ENV | |
- name: Install apt dependencies | |
uses: ./.github/actions/install-apt-dependencies | |
- name: Create AMICI sdist | |
run: scripts/buildSdist.sh | |
- name: Install python sdist | |
run: pip3 install -v --user $(ls -t python/sdist/dist/amici-*.tar.gz | head -1) | |
- name: Test import | |
run: python -m amici | |
sdist_macos: | |
name: sdist Install macos | |
runs-on: macos-latest | |
strategy: | |
matrix: | |
python-version: ["3.11"] | |
steps: | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- uses: actions/checkout@v4 | |
- run: git fetch --prune --unshallow | |
- run: echo "AMICI_DIR=$(pwd)" >> $GITHUB_ENV | |
# install amici dependencies | |
- name: homebrew | |
run: | | |
brew install hdf5 swig gcc cppcheck libomp boost \ | |
&& brew ls -v boost \ | |
&& brew ls -v libomp \ | |
&& echo LDFLAGS="-L/usr/local/lib/ -L/usr/local/Cellar/boost/1.81.0_1/lib/" >> $GITHUB_ENV \ | |
&& echo CPPFLAGS="-I /usr/local/Cellar/boost/1.81.0_1/include/" >> $GITHUB_ENV | |
- name: Create AMICI sdist | |
run: scripts/buildSdist.sh | |
- name: Install python sdist | |
run: pip3 install -v --user $(ls -t python/sdist/dist/amici-*.tar.gz | head -1) | |
- name: Test import | |
run: python -m amici |