Fix piecewise/Heaviside handling #2875
Workflow file for this run
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name: SBML | |
on: | |
push: | |
branches: | |
- develop | |
- master | |
- release** | |
pull_request: | |
paths: | |
- .github/workflows/test_sbml_semantic_test_suite.yml | |
- python/sdist/amici/de_export.py | |
- python/sdist/amici/de_model.py | |
- python/sdist/amici/sbml_import.py | |
- python/sdist/amici/import_utils.py | |
- scripts/run-SBMLTestsuite.sh | |
- tests/testSBMLSuite.py | |
- tests/conftest.py | |
check_suite: | |
types: [requested] | |
workflow_dispatch: | |
jobs: | |
build: | |
name: SBML Semantic Test Suite | |
runs-on: ubuntu-22.04 | |
strategy: | |
fail-fast: false | |
matrix: | |
cases: ["1-250", "251-500", "501-750", "751-1000", | |
"1000-1250", "1251-"] | |
python-version: [ "3.9" ] | |
steps: | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- uses: actions/checkout@v3 | |
with: | |
fetch-depth: 1 | |
- name: Install apt dependencies | |
uses: ./.github/actions/install-apt-dependencies | |
- run: AMICI_PARALLEL_COMPILE=2 ./scripts/installAmiciSource.sh | |
- run: AMICI_PARALLEL_COMPILE=2 ./scripts/run-SBMLTestsuite.sh ${{ matrix.cases }} | |
- name: "Upload artifact: SBML semantic test suite results" | |
uses: actions/upload-artifact@v3 | |
with: | |
name: amici-semantic-results | |
path: tests/amici-semantic-results | |
- name: Codecov SBMLSuite | |
if: github.event_name == 'pull_request' || github.repository_owner == 'AMICI-dev' | |
uses: codecov/[email protected] | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
file: coverage_SBMLSuite.xml | |
flags: sbmlsuite | |
fail_ci_if_error: true |