..

AMICI-dev · Sep 19, 2023 · 42aa547 · 42aa547
1 parent 6366406
commit 42aa547
Showing 1 changed file with 8 additions and 12 deletions.
diff --git a/python/examples/example_steadystate/ExampleSteadystate.ipynb b/python/examples/example_steadystate/ExampleSteadystate.ipynb
@@ -448,7 +448,7 @@
     "print(\n",
     "    \"Simulation was run using model default parameters as specified in the SBML model:\"\n",
     ")\n",
-    "print(model.getParameters())"
+    "print(dict(zip(model.getParameterIds(), model.getParameters())))"
    ]
   },
   {
@@ -863,18 +863,14 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 13,
-   "outputs": [
-    {
-     "name": "stdout",
-     "output_type": "stream",
-     "text": [
-      "(1.0, 0.5, 0.4, 2.0, 0.1, 2.0, 3.0, 0.2)\n"
-     ]
-    }
-   ],
+   "execution_count": null,
+   "outputs": [],
    "source": [
-    "print(model.getParameters())"
+    "# In particular for interactive use, ReturnDataView.by_id() and amici.evaluate provides a more convenient way to access slices of the result:\n",
+    "# Time trajectory of observable observable_x1\n",
+    "print(f\"{rdata.by_id('observable_x1')=}\")\n",
+    "# Time trajectory of state variable x2\n",
+    "print(f\"{rdata.by_id('x2')=}\")"
    ],
    "metadata": {
     "collapsed": false,