rPIE tweaks, comment out rPIE scan position correction as it's not doing things correctly (I'll fix later). #340
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| name: Run unit tests | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - "tests/**" | |
| - "src/tike/**" | |
| - pyproject.toml | |
| - .github/workflows/unit-tests.yml | |
| pull_request: | |
| branches: | |
| - main | |
| paths: | |
| - "tests/**" | |
| - "src/tike/**" | |
| - pyproject.toml | |
| - .github/workflows/unit-tests.yml | |
| jobs: | |
| linux-x86-no-mpi: | |
| runs-on: self-hosted | |
| continue-on-error: true | |
| strategy: | |
| matrix: | |
| python-version: | |
| - "3.10" | |
| - "3.11" | |
| - "3.9" | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - run: | | |
| echo ${CUDA_VISIBLE_DEVICES} | |
| echo "CUDA_VERSION=$(nvidia-smi -q | grep "CUDA Version" | sed 's/CUDA Version\s*: //' | sed 's/\.[0-9]*//')" >> "$GITHUB_ENV" | |
| - run: | | |
| conda config --remove channels defaults || true | |
| conda config --add channels conda-forge | |
| conda config --show channels | |
| name: Configure Conda to only use conda-forge | |
| - run: > | |
| conda create --quiet --yes --force | |
| -n tike | |
| --channel conda-forge | |
| --file requirements.txt | |
| pytest | |
| python=${{ matrix.python-version }} | |
| cuda-version=$CUDA_VERSION | |
| name: Create build environment | |
| - run: conda remove -n tike mpi4py --yes --quiet || true | |
| name: Remove MPI from test environment | |
| - run: conda list -n tike | |
| name: List build environment | |
| - run: | | |
| source activate tike | |
| pip install . --no-deps --no-build-isolation | |
| name: Setup and install | |
| - run: | | |
| source activate tike | |
| python tests/print-gpu-info.py | |
| name: Print GPU info | |
| - run: | | |
| source activate tike | |
| export TIKE_TEST_CI | |
| pytest -vs tests | |
| name: Run tests | |
| - run: | | |
| cd tests/result | |
| zip -r9 ../../result.zip . | |
| name: Zip results | |
| - uses: actions/upload-artifact@v3 | |
| if: ${{ matrix.python-version == '3.9' }} | |
| with: | |
| path: result.zip | |
| name: Without MPI results | |
| - run: conda remove -n tike --all | |
| name: Clean up environment | |
| linux-x86-with-mpi: | |
| runs-on: self-hosted | |
| continue-on-error: true | |
| strategy: | |
| matrix: | |
| python-version: | |
| - "3.8" | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - run: | | |
| echo ${CUDA_VISIBLE_DEVICES} | |
| echo "CUDA_VERSION=$(nvidia-smi -q | grep "CUDA Version" | sed 's/CUDA Version\s*: //' | sed 's/\.[0-9]*//')" >> "$GITHUB_ENV" | |
| - run: | | |
| conda config --remove channels defaults || true | |
| conda config --add channels conda-forge | |
| conda config --show channels | |
| name: Configure Conda to only use conda-forge | |
| - run: > | |
| conda create --quiet --yes --force | |
| -n tike | |
| --channel conda-forge | |
| --file requirements.txt | |
| pytest | |
| python=${{ matrix.python-version }} | |
| 'openmpi=*=h*' | |
| mpi4py | |
| cuda-version=$CUDA_VERSION | |
| name: Create build environment | |
| - run: conda list -n tike | |
| name: List build environment | |
| - run: | | |
| source activate tike | |
| pip install . --no-deps --no-build-isolation | |
| name: Setup and install | |
| - run: | | |
| source activate tike | |
| python tests/print-gpu-info.py | |
| name: Print GPU info | |
| - run: | | |
| source activate tike | |
| export OMPI_MCA_opal_cuda_support=true | |
| export TIKE_TEST_CI | |
| mpiexec -n 2 python -m pytest -vs tests | |
| name: Run tests with MPI | |
| - run: | | |
| cd tests/result | |
| zip -r9 ../../result.zip . | |
| name: Zip results | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| path: result.zip | |
| name: MPI results | |
| - run: conda remove -n tike --all | |
| name: Clean up environment |