laggedLGCP

R package for fitting multivariate Poisson or Coalescent processes with a time lag.

Installation

1. Install phylodyn as detailed at mdkarcher/phylodyn
2. Install rstan -- http://mc-stan.org/interfaces/rstan.
3. Install rstantools via CRAN:

install.packages("rstantools")

4. Install laggedLGCP via

devtools::install_github("AlexanderVR/laggedLGCP", args="--preclean", build_vignettes = FALSE)