Add slides for scRNAseq intro & differential expression #15
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reformat table to remove long lines
sjspielman
reviewed
Dec 4, 2024
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Slides look good, and schedule format looks good! Just two things I noticed:
- Intro slides: I think it makes sense to mention briefly (one bullet or sub-bullet on the last slide) that quantitative approaches to evaluate cluster quality exist. Just a little teaser, no details!
- DEG slides: Something rather wonky appears to have happened during the PDF conversion on slides 9-10. I just tried re-exporting, and indeed google slides did the weird thing again. I suspect we just need to make these diagrams into separate images rather than making them with in google slides directly :/
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Thanks @sjspielman: I added a line about quantitative evaluation of clustering. I also recreated the PDF for the DEG slides by downloading a powerpoint version and saving that as PDF locally, which seemed to work fine. |
sjspielman
reviewed
Dec 4, 2024
| | **Day 1** | **2024-12-10** | ||
| | 9:00 AM | Welcome, Introductions and Getting Started | ||
| | 10:00 AM | Introduction/Refresher to Single-cell Analysis with R and Bioconductor | ||
| | | [ Single-cell Analysis with R slides (PDF) ](../slides/2024-12-10_scRNAseq-data-intro.pdf) |
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did you mean to have spaces here actually? same Q for deg slides
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Not necessarily, but they don't matter at all.
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The main goal here is to add two sets of slides as part of #4.
I made only slight formatting edits to the slides, so I would not expect any real trouble.
However, I was very annoyed by the very long lines everywhere in the table, so I cut off the trailing right
|and the associated spaces. This should make future edits much more pleasant, without affecting the rendered table at all as the outer pipes are optional.