Resolve inconsistent parsing in module autoclean-sftp for certain folders

CHANGELOG.md

@@ -23,6 +23,8 @@ Code contributions to the hotfix:
 
 #### Fixes
 
+- Added missing url for service assembly_annotation in module list
+- Autoclean-sftp refined folder name parsing with regex label adjustment 
 - Autoclean_sftp does not crash anymore. New argument from 'utils.prompt_yn_question()' in v2.0.0 was missing: 'dflt'
 - Bioinfo-doc now sends email correctly to multiple CCs
 

README.md

@@ -110,7 +110,7 @@ Output:
 ┏━━━━━━━━━━━━━━━━━━━━━━━━┳━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━┳━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━┓
 ┃           Service name ┃ Description                               ┃ Github                                     ┃
 ┡━━━━━━━━━━━━━━━━━━━━━━━━╇━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━╇━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━┩
-│    assembly_annotation │ Nextflow assembly pipeline to assemble    │                                            │
+│    assembly_annotation │ Nextflow assembly pipeline to assemble    │ https://github.com/Daniel-VM/bacass/...    │
 │                        │ bacterial genomes                         │                                            │
 │        mtbseq_assembly │ Mycobacterium tuberculosis mapping,       │ https://github.com/ngs-fzb/MTBseq_source   │
 │                        │ variant calling and detection of          │                                            │

bu_isciii/autoclean_sftp.py

@@ -109,7 +109,7 @@ def check_path_exists(self):
     def get_sftp_services(self):
         self.sftp_services = {}  # {sftp-service_path : last_update}
         service_pattern = (
-            r"^[SRV][A-Z]+[0-9]+_\d{8}_[A-Z0-9]+_[a-zA-Z]+(?:\.[a-zA-Z]+)?_[a-zA-Z]$"
+            r"^[SRV][A-Z]+[0-9]+_\d{8}_[A-Z0-9.-]+_[a-zA-Z]+(?:\.[a-zA-Z]+)?_[a-zA-Z]$"
         )
 
         stderr.print("[blue]Scanning " + self.path + "...")

bu_isciii/templates/services.json

@@ -2,7 +2,7 @@
     "assembly_annotation": {
         "label": "",
         "template": "assembly",
-        "url": "",
+        "url": "https://github.com/Daniel-VM/bacass/tree/buisciii-develop",
         "order": 1,
         "begin": "",
         "end": "",