major update of functions

.github/workflows/pkgdown.yaml

@@ -33,7 +33,7 @@ jobs:
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
-          extra-packages: any::pkgdown, any::tidyverse, any::drda, any::pander, any::metafor, any::kableExtra, any::plyr, any::ggprism, any::ggnewscale, any::GLMcat, any::quarto,any::Hmisc,any::outliers, any::multcomp, any::emmeans, local::.
+          extra-packages: any::pkgdown, any::tidyverse, any::drda, any::pander, any::metafor, any::kableExtra, any::plyr, any::ggprism, any::ggnewscale, any::GLMcat, any::quarto,any::Hmisc,any::outliers, any::multcomp, any::emmeans, any::patchwork, local::.
           needs: website
 
       - name: Build site

NAMESPACE

@@ -1,8 +1,12 @@
 # Generated by roxygen2: do not edit by hand
 
 S3method(calpha.test,fisher)
+S3method(plot,StepDownRSCABS)
+S3method(print,RSCABS)
+S3method(print,StepDownRSCABS)
 S3method(print,drcComp)
 S3method(print,tskresult)
+S3method(summary,StepDownRSCABS)
 S3method(tsk,data.frame)
 S3method(tsk,numeric)
 export("%>%")
@@ -49,19 +53,45 @@ export(rankTransform)
 export(reshape_drcData)
 export(runRSCABS)
 export(run_RSCA)
+export(run_all_threshold_tests)
+export(run_threshold_RSCA)
 export(simDRdata)
 export(simplifyTreatment)
 export(stepDownRSCABS)
 export(stepKRSCABS)
+export(step_down_RSCABS)
 export(summaryZG)
 export(treatment2dose)
 export(tsk)
 export(williamsTest_JG)
 import(dplyr)
 import(ggplot2)
 import(scales)
+importFrom(dplyr,across)
+importFrom(dplyr,arrange)
+importFrom(dplyr,bind_rows)
+importFrom(dplyr,filter)
+importFrom(dplyr,group_by)
+importFrom(dplyr,left_join)
+importFrom(dplyr,mutate)
+importFrom(dplyr,select)
+importFrom(dplyr,summarize)
+importFrom(dplyr,where)
+importFrom(ggplot2,aes)
+importFrom(ggplot2,element_blank)
+importFrom(ggplot2,element_text)
+importFrom(ggplot2,geom_text)
+importFrom(ggplot2,geom_tile)
+importFrom(ggplot2,ggplot)
+importFrom(ggplot2,labs)
+importFrom(ggplot2,scale_fill_gradient)
+importFrom(ggplot2,scale_y_reverse)
+importFrom(ggplot2,theme)
+importFrom(ggplot2,theme_minimal)
 importFrom(isotone,gpava)
 importFrom(magrittr,"%>%")
 importFrom(metafor,rma.mh)
 importFrom(purrr,map2)
+importFrom(stats,aggregate)
+importFrom(stats,fisher.test)
 importFrom(stats,pnorm)