DOC Update db_harmonisation README

db_harmonisation/README.md

@@ -1,16 +1,16 @@
-# Crude AMR database harmonisation
+# Automated AMR database harmonisation
 
-We need a quick way to compare results between different AMR databases
-While there are better ideas of dealing with this problem more robustly 
-(...speak to me about genomically-informed nomenclature normalisation),
-for mapping NCBI and ResFinder to CARD's ARO:
+argNorm uses two layers for AMR database harmonisation:
 
-- Download NCBI and ResFinder databases
+1. Automated annotation (implemented in this directory)
+2. Manual curation
 
-- Run them through RGI
 
-- Using hits, create a mapping of NCBI and ResFinder genes to the ARO
+The approach used here is:
 
+- Download NCBI and ResFinder databases
+- Run them through RGI
+- Using hits, create a mapping of NCBI and ResFinder genes to the ARO
 - Highlight any situation of no hits/disconnect for manual curation
 
 ## Running