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mcmcensemble 3.0.0

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@Bisaloo Bisaloo released this 20 Mar 16:50
· 14 commits to main since this release

mcmcensemble 3.0.0

Major changes

  • the arguments lower.inits and upper.inits are deprecated in favour of
    inits which leave more flexibility to the user. Please read the detailed
    blog post for more background about this change and how to migrate.
  • inits can now be a data.frame or a matrix
  • d.e.mcmc() and s.m.mcmc() are not exported any more. Please use the
    wrapper MCMCEnsemble() instead.
  • there is a new vignette
    (vignette("diagnostic-pkgs", package = "mcmcensemble")) presenting two
    different options (coda and bayesplot) to plot and evaluate the MCMC chains
    produced by mcmcensemble.

Bug fixes

  • The chains now run fine even in the case where there is only one iteration
    (i.e., max.iter %/% n.walkers == 1)
  • The error message when the coda package is absent and coda = TRUE now
    correctly prompt the user to use coda = FALSE if they do not wish to install
    coda.