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The Blue Brain Project

Open Source Software produced and used by the Blue Brain Project

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  1. HighFive HighFive Public

    HighFive - Header-only C++ HDF5 interface

    C++ 676 160

  2. Brayns Brayns Public

    Visualizer for large-scale and interactive ray-tracing of neurons

    C++ 289 45

  3. nexus nexus Public

    Blue Brain Nexus - A knowledge graph for data-driven science

    Scala 278 74

  4. BluePyOpt BluePyOpt Public

    Blue Brain Python Optimisation Library

    Python 198 96

  5. CoreNeuron CoreNeuron Public archive

    Simulator optimized for large scale neural network simulations.

    C++ 135 38

  6. NeuroMorphoVis NeuroMorphoVis Public

    A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.

    Python 127 26

Repositories

Showing 10 of 269 repositories
  • layer-recognition Public

    Layer recognition

    BlueBrain/layer-recognition’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Oct 4, 2024
  • Brayns Public

    Visualizer for large-scale and interactive ray-tracing of neurons

    BlueBrain/Brayns’s past year of commit activity
    C++ 289 LGPL-3.0 45 0 0 Updated Oct 4, 2024
  • MorphIO Public

    A python and C++ library for reading and writing neuronal morphologies

    BlueBrain/MorphIO’s past year of commit activity
    C++ 26 Apache-2.0 23 34 (1 issue needs help) 13 Updated Oct 4, 2024
  • atlas-densities Public

    Tools to compute densities in the context of brain atlases.

    BlueBrain/atlas-densities’s past year of commit activity
    Python 3 Apache-2.0 8 8 5 Updated Oct 4, 2024
  • BlueBrain/cgal-pybind’s past year of commit activity
    C++ 0 Apache-2.0 1 0 0 Updated Oct 4, 2024
  • NeuroTS Public

    Topological Neuron Synthesis

    BlueBrain/NeuroTS’s past year of commit activity
    Python 36 Apache-2.0 5 2 4 Updated Oct 4, 2024
  • parquet-converters Public

    Convert neuroscientific connectome data formats

    BlueBrain/parquet-converters’s past year of commit activity
    C++ 0 Apache-2.0 0 1 1 Updated Oct 3, 2024
  • neuroagent Public

    LLM agent made to communicate with different neuroscience related tools

    BlueBrain/neuroagent’s past year of commit activity
    Python 5 Apache-2.0 0 0 4 Updated Oct 3, 2024
  • nmodl-references Public

    nmodl references

    BlueBrain/nmodl-references’s past year of commit activity
    C++ 0 Apache-2.0 0 0 1 Updated Oct 3, 2024
  • nmodl Public

    Code Generation Framework For NEURON MODeling Language

    BlueBrain/nmodl’s past year of commit activity
    C++ 53 Apache-2.0 15 162 (12 issues need help) 25 Updated Oct 3, 2024