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@BuildACell

Build-A-Cell

Open collaboration supporting the science and engineering of building synthetic cells

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  1. bioCRNpyler bioCRNpyler Public

    A modular compiler for biological chemical reaction networks

    Python 40 24

  2. liposome-kit liposome-kit Public

    Build-A-Cell protocol for making liposomes

    Jupyter Notebook 11 13

  3. engineering engineering Public

    Engineering website

    Jupyter Notebook 9 3

  4. buildacell.github.io buildacell.github.io Public

    CSS 5 2

  5. subsbml subsbml Public

    Python package for managing systems and subsystems of SBML models

    Jupyter Notebook 5 5

  6. txtlsim-python txtlsim-python Public

    Cell-free simulation toolbox in Python

    Python 4 4

Repositories

Showing 10 of 12 repositories
  • bioCRNpyler Public

    A modular compiler for biological chemical reaction networks

    BuildACell/bioCRNpyler’s past year of commit activity
    Python 40 BSD-3-Clause 24 27 (2 issues need help) 3 Updated Aug 27, 2024
  • liposome-kit Public

    Build-A-Cell protocol for making liposomes

    BuildACell/liposome-kit’s past year of commit activity
    Jupyter Notebook 11 13 8 1 Updated Jan 30, 2024
  • BACRFC5_DNA_database Public

    Files supporting the development of BACRFC5: a proposal for a DNA parts database for BAC

    BuildACell/BACRFC5_DNA_database’s past year of commit activity
    1 MIT 0 0 0 Updated Nov 14, 2023
  • pure-prediction Public

    A web app to predict protein expression in PURE cell-free transcription translation.

    BuildACell/pure-prediction’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Dec 10, 2022
  • engineering Public

    Engineering website

    BuildACell/engineering’s past year of commit activity
    Jupyter Notebook 9 3 3 5 Updated Oct 5, 2022
  • txtlsim Public

    Cell-free expression modeling toolbox for MATLAB

    BuildACell/txtlsim’s past year of commit activity
    MATLAB 0 8 30 2 Updated May 24, 2022
  • VivariumPURE Public

    Using Vivarium to build a modular model of PURE

    BuildACell/VivariumPURE’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 8, 2022
  • subsbml Public

    Python package for managing systems and subsystems of SBML models

    BuildACell/subsbml’s past year of commit activity
    Jupyter Notebook 5 BSD-3-Clause 5 12 0 Updated Oct 19, 2020
  • buildacell.github.io Public
    BuildACell/buildacell.github.io’s past year of commit activity
    CSS 5 Apache-2.0 2 0 1 Updated Jun 22, 2020
  • interlab-modeling Public

    Modeling of biological circuits developed in the interlab integration study of Build-A-Cell

    BuildACell/interlab-modeling’s past year of commit activity
    Jupyter Notebook 2 2 0 0 Updated Jan 31, 2020
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