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Implement argument checking for exported functions #114

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merged 14 commits into from
Dec 20, 2022
Merged

Implement argument checking for exported functions #114

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9352b16
bind_tibbles() arg checking
ezraporter Dec 14, 2022
1d85fd6
extract_tibble/s() arg checking
ezraporter Dec 14, 2022
2a52040
read_redcap/make_labelled arg checking
ezraporter Dec 15, 2022
28708c2
refactor checkmate checks
ezraporter Dec 15, 2022
84c6a62
Update test-read_redcap.R
ezraporter Dec 15, 2022
40a7de9
lint
ezraporter Dec 15, 2022
01359d7
use call in cli_*()
ezraporter Dec 16, 2022
908212a
add check_arg_is_supertbl()
ezraporter Dec 16, 2022
419332f
add check_arg_is_valid_token
ezraporter Dec 19, 2022
13026a9
use S3 class in check_arg_is_supertbl
ezraporter Dec 19, 2022
38f179e
add superheroes_supertbl data for examples
ezraporter Dec 19, 2022
d7ed2e4
update error message
ezraporter Dec 20, 2022
e24d454
update S3 class
ezraporter Dec 20, 2022
335634d
add example error messages
ezraporter Dec 20, 2022
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11 changes: 11 additions & 0 deletions NAMESPACE
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Original file line number Diff line number Diff line change
Expand Up @@ -20,13 +20,19 @@ importFrom(REDCapR,redcap_event_instruments)
importFrom(REDCapR,redcap_instruments)
importFrom(REDCapR,redcap_metadata_read)
importFrom(REDCapR,redcap_read_oneshot)
importFrom(REDCapR,sanitize_token)
importFrom(checkmate,assert_character)
importFrom(checkmate,assert_data_frame)
importFrom(checkmate,check_character)
importFrom(checkmate,check_choice)
importFrom(checkmate,check_environment)
importFrom(checkmate,check_logical)
importFrom(checkmate,expect_character)
importFrom(checkmate,expect_double)
importFrom(checkmate,expect_factor)
importFrom(checkmate,expect_logical)
importFrom(cli,cli_abort)
importFrom(cli,cli_vec)
importFrom(cli,cli_warn)
importFrom(dplyr,"%>%")
importFrom(dplyr,across)
Expand All @@ -50,17 +56,22 @@ importFrom(purrr,compose)
importFrom(purrr,map)
importFrom(purrr,map2)
importFrom(purrr,map_int)
importFrom(purrr,map_lgl)
importFrom(purrr,pluck)
importFrom(rlang,"!!!")
importFrom(rlang,.data)
importFrom(rlang,as_closure)
importFrom(rlang,as_label)
importFrom(rlang,caller_arg)
importFrom(rlang,caller_env)
importFrom(rlang,check_installed)
importFrom(rlang,current_env)
importFrom(rlang,enquo)
importFrom(rlang,env_poke)
importFrom(rlang,global_env)
importFrom(rlang,is_atomic)
importFrom(rlang,is_bare_formula)
importFrom(rlang,is_bare_list)
importFrom(rlang,new_environment)
importFrom(stringi,stri_split_fixed)
importFrom(stringr,str_detect)
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16 changes: 8 additions & 8 deletions R/bind_tibbles.R
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Original file line number Diff line number Diff line change
Expand Up @@ -22,27 +22,27 @@
#' @importFrom purrr map2 pluck
#'
#' @examples
#' \dontrun{
#' # Create an empty environment
#' my_env <- new.env()
#'
#' ls(my_env)
#'
#' # Mock up a supertibble
#' supertbl <- tibble::tribble(
#' ~redcap_form_name, ~redcap_data, ~structure,
#' "super_hero_powers", list(), "repeating",
#' "heroes_information", list(), "nonrepeating"
#' )
#' superheroes_supertbl
#'
#' bind_tibbles(supertbl, my_env)
#' bind_tibbles(superheroes_supertbl, my_env)
#'
#' ls(my_env)
#'
#'}
#' @export

bind_tibbles <- function(supertbl,
environment = global_env(),
tbls = NULL) {
check_arg_is_supertbl(supertbl, req_cols = "redcap_data")
check_arg_is_env(environment)
check_arg_is_character(tbls, null.ok = TRUE, any.missing = FALSE, min.len = 1)

# Name variables
my_supertbl <- supertbl

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