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  1. ClearAnatomics/ClearMap ClearAnatomics/ClearMap Public

    ClearMap 2 with WobblyStitcher, TubeMap and CellMap

    Jupyter Notebook 112 46

  2. ClearAnatomics/ClearMapDocumentation ClearAnatomics/ClearMapDocumentation Public

    ClearMap Documentation

    Jupyter Notebook 2 3

  3. ClearMap ClearMap Public

    ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.

    Python 51 40

  4. SimKernel SimKernel Public

    SimKernel controls parameter scans and iterations for any given C++ code

    C++ 14 5

  5. CElegansBehaviour CElegansBehaviour Public

    Analysis tools for long term C. Elegans Behaviour

    Python 8 4

  6. StemCellTracker StemCellTracker Public

    Tool to Segment and Track Stem Cells in 3D

    MATLAB 6 14