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Merge pull request #345 from smartlixx/master
Update build_CoLM_gnu.yml to use ubuntu 24.04 and 22.04
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,125 @@ | ||
| name: Build_CoLM202X_intel | ||
| on: | ||
| pull_request: | ||
| branches: | ||
| - master | ||
| paths-ignore: | ||
| - 'postprocess/**' | ||
| - 'preprocess/**' | ||
| - 'run/**' | ||
| - 'README.md' | ||
| - '.gitignore' | ||
| - '**/**.sh' | ||
| push: | ||
| branches: | ||
| - master | ||
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| workflow_dispatch: | ||
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| jobs: | ||
| Build-CoLM-intel: | ||
| runs-on: ${{ matrix.os }} | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| os: [ubuntu-latest, ubuntu-22.04] | ||
| mpi: ['mpich', 'openmpi', 'intelmpi'] | ||
| toolchain: | ||
| - {compiler: intel, version: '2024.2'} | ||
| - {compiler: intel-classic, version: '2021.12'} | ||
| # include: | ||
| # - os: ubuntu-latest | ||
| # toolchain: {compiler: gcc, version: 12} | ||
| # exclude: | ||
| # - os: ubuntu-22.04 | ||
| # toolchain: {compiler: gcc, version: 14} | ||
| # - mpi: 'mpich' | ||
| # toolchain: {compiler: gcc, version: 9} | ||
| # # mpich compiling FCFLAG has --fallow-type-mismatch, and will cause gfortran 9 failing | ||
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| steps: | ||
| - uses: actions/checkout@v4 | ||
| - uses: mpi4py/setup-mpi@v1 | ||
| with: | ||
| mpi: ${{ matrix.mpi }} | ||
| - uses: fortran-lang/setup-fortran@v1 | ||
| id: setup-fortran | ||
| with: | ||
| compiler: ${{ matrix.toolchain.compiler }} | ||
| version: ${{ matrix.toolchain.version }} | ||
| #- name: Install mkl | ||
| # shell: bash -l {0} | ||
| # run: | | ||
| # sudo apt-get update & sudo apt-get install -y intel-oneapi-mkl | ||
| # # source /opt/intel/oneapi/setvars.sh | ||
| - name: Install hdf5 | ||
| run: | | ||
| mkdir -p /opt/src | ||
| cd /opt/src | ||
| wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.10/src/hdf5-1.10.10.tar.gz | ||
| tar -xzf hdf5-1.10.10.tar.gz | ||
| cd hdf5-1.10.10 | ||
| ./configure --prefix=/opt/hdf5 --enable-parallel --enable-fortran | ||
| make -j 4 install 2>&1 | tee build.log | ||
| export HDF5=/opt/hdf5 | ||
| export PATH=${HDF5}/bin:${PATH}' | ||
| export LD_LIBRARY_PATH=${HDF5}/lib:${LD_LIBRARY_PATH} | ||
| - name: Install netcdf-c library | ||
| shell: bash -l {0} | ||
| run: | | ||
| cd /opt/src | ||
| wget https://downloads.unidata.ucar.edu/netcdf-c/4.9.2/netcdf-c-4.9.2.tar.gz | ||
| tar -xzf netcdf-c-4.9.2.tar.gz | ||
| cd netcdf-c-4.9.2 | ||
| export CPPFLAGS="-I${HDF5}/include" | ||
| export LDFLAGS="-L${HDF5}/lib" | ||
| ./configure --prefix=/opt/netcdf --disable-dap-remote-tests --enable-mmap --enable-netcdf4 | ||
| make -j 4 install | ||
| export NETCDF=/opt/netcdf | ||
| export PATH=${NETCDF}/bin:${PATH} | ||
| export LD_LIBRARY_PATH=${NETCDF}/lib:${LD_LIBRARY_PATH} | ||
| - name: Install netcdf-fortran library | ||
| shell: bash -l {0} | ||
| run: | | ||
| cd /opt/src | ||
| wget https://downloads.unidata.ucar.edu/netcdf-fortran/4.5.3/netcdf-fortran-4.5.3.tar.gz | ||
| tar -xzf netcdf-fortran-4.5.3.tar.gz | ||
| cd netcdf-fortran-4.5.3 | ||
| export CPPFLAGS="-I${HDF5}/include" | ||
| export LDFLAGS="-L${HDF5}/lib" | ||
| ./configure --prefix=/opt/netcdf | ||
| make install | ||
| - name: Test mpi and netcdf | ||
| #run: mpif90 -v | ||
| run: which mpif90 | ||
| - name: Test netcdf | ||
| run: nc-config --all | ||
| - name: Build CoLM202X | ||
| # run: make clean && make all | ||
| run: | | ||
| cd ${{ github.workspace }} | ||
| ln -sf include/Makeoptions.github.intel include/Makeoptions | ||
| TestList=./.github/workflows/TestCaseLists | ||
| for CaseName in `awk '{print $1}' $TestList` | ||
| do | ||
| echo "+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++" | ||
| echo "Create test cases" | ||
| echo $CaseName | ||
| echo "+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++" | ||
| echo defineh `cat $TestList |grep $CaseName |awk '{print $2,$3,$4,$5,$6,$7,$8}'` | ||
| ./.github/workflows/create_defineh.bash `cat $TestList |grep $CaseName |awk '{print $2,$3,$4,$5,$6,$7,$8}'` | ||
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| echo "Create test case $CaseName Complete!" | ||
| cat ./include/define.h | ||
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| echo "...................................................................." | ||
| echo "Start Compilation $CaseName" | ||
| echo "...................................................................." | ||
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| make clean && make all | ||
| done | ||
|
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| echo "----------------------------------------------------------------------" | ||
| echo "All test cases are compiled successfully! " | ||
| echo "----------------------------------------------------------------------" |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,36 @@ | ||
| # ======================================================= | ||
| # mpif90 - ifort | ||
| # | ||
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| FF = mpif90 | ||
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| NETCDF_LIB = /opt/netcdf/lib | ||
| NETCDF_INC = /opt/netcdf/include | ||
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| MOD_CMD = -module | ||
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| FOPTS = -qopenmp -O2 -traceback -r8 -free -check uninit -check bounds | ||
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| LDFLAGS = -L${NETCDF_LIB} -lnetcdff -llapack -lblas | ||
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| #============================================================ | ||
| # CaMa-Flood Mkinclude (for Linux, Intel fortran) | ||
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| RM = /bin/rm -f | ||
| CP = /bin/cp | ||
| #---- | ||
| # Pre-Prosessing options | ||
| # DMPI=-DUseMPI: activate when MPI parallelization is used | ||
| # DCDF=-DUseCDF: activate when using netCDF, comment out when not needed | ||
| # DATM=-DNoAtom: activate when OMP ATOMIC calculation should be avoided (bit identical simulation) | ||
| #---- | ||
| #DMPI=-DUseMPI | ||
| DCDF=-DUseCDF | ||
| #DATM=-DNoAtom | ||
| CFLAGS=$(DMPI) $(DCDF) $(DATM) | ||
| #---- | ||
| # FCMP: main program (src/), FC: pre/post process (map/ etc/) | ||
| FCMP = ifort -qopenmp | ||
| FC = ifort | ||
| LFLAGS = | ||
| FFLAGS = -O3 -warn all -fpp -free -assume byterecl -heap-arrays -nogen-interface -lpthread -static-intel |