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add dim_reduce to aggregates, refactor patch utils (#456) #291

add dim_reduce to aggregates, refactor patch utils (#456)

add dim_reduce to aggregates, refactor patch utils (#456) #291

Workflow file for this run

# Calculates new coverage for the base branch and uploads to codecov
name: Coverage
on:
push:
branches:
- master
jobs:
calc_coverage:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: "get tags"
run: |
git fetch --tags --force # Retrieve annotated tags.
- uses: mamba-org/setup-micromamba@v1
with:
micromamba-version: '1.5.8-0' # versions: https://github.com/mamba-org/micromamba-releases
environment-file: environment.yml
init-shell: >-
bash
powershell
cache-environment: true
post-cleanup: 'all'
# Not sure why this is needed but it appears to be the case
- name: fix env
shell: bash -l {0}
run: |
micromamba shell init --shell bash --root-prefix=~/micromamba
eval "$(micromamba shell hook --shell bash)"
micromamba activate dascore
- name: install dascore
shell: bash -l {0}
run: |
python -m pip install -e .[test]
- name: run test suite
shell: bash -l {0}
run: |
pytest -s --cov dascore --cov-report=xml
- uses: codecov/codecov-action@v4
with:
fail_ci_if_error: true
files: ./coverage.xml
flags: unittests # optional
name: master_tests # optional
token: ${{ secrets.CODECOV_TOKEN }} # required