Updated modulefiles to point to spack-stack NOAA-EMC#474 NOAA-EMC#571 N…

…OAA-EMC#589

modulefiles/gsi_cheyenne.gnu.lua

@@ -1,32 +1,30 @@
 help([[
 ]])
 
-load("cmake/3.22.0")
-load("python/3.7.9")
-load("ncarenv/1.3")
-load("gnu/10.1.0")
-load("mpt/2.22")
-load("ncarcompilers/0.5.0")
-unload("netcdf")
+unload("ncarenv/1.3")
+unload("intel/19.1.1")
+unload("ncarcompilers/0.5.0")
+unload("mpt/2.25")
+unload("netcdf/4.8.1")
 
-prepend_path("MODULEPATH", "/glade/work/epicufsrt/contrib/hpc-stack/gnu10.1.0/modulefiles/stack")
+prepend_path("MODULEPATH", "/glade/work/epicufsrt/contrib/spack-stack/cheyenne/spack-stack-1.4.1/envs/unified-env/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/glade/work/jedipara/cheyenne/spack-stack/modulefiles/misc")
 
-load("hpc/1.2.0")
-load("hpc-gnu/10.1.0")
-load("hpc-mpt/2.22")
+local stack_python_ver=os.getenv("stack_python_ver") or "3.9.12"
+local stack_gnu_ver=os.getenv("stack_gnu_ver") or "10.1.0"
+local stack_openmpi_ver=os.getenv("stack_openmpi_ver") or "4.1.1"
+local cmake_ver=os.getenv("cmake_ver") or "3.22.0"
 
--- Preload w3nco to work around nemsio "find_dependency(w3nco)" hpc-stack bug
-load("w3nco/2.4.1")
+load(pathJoin("stack-gcc", stack_gnu_ver))
+load(pathJoin("stack-openmpi", stack_openmpi_ver))
+load(pathJoin("stack-python", stack_python_ver))
+load(pathJoin("cmake", cmake_ver))
 
 load("gsi_common")
 
-local prod_util_ver=os.getenv("prod_util_ver") or "1.2.2"
-load(pathJoin("prod_util", prod_util_ver))
+pushenv("CFLAGS", "-xHOST")
+pushenv("FFLAGS", "-xHOST")
 
-pushenv("MKLROOT", "/glade/u/apps/opt/intel/2022.1/mkl/latest")
-
-pushenv("CC",  "mpicc")
-pushenv("FC",  "mpif90")
-pushenv("CXX", "mpicxx")
+pushenv("GSI_BINARY_SOURCE_DIR", "/glade/work/epicufsrt/contrib/GSI_data/fix/20230601")
 
 whatis("Description: GSI environment on Cheyenne with GNU Compilers")

modulefiles/gsi_cheyenne.intel.lua

@@ -1,26 +1,30 @@
 help([[
 ]])
 
-load("cmake/3.22.0")
-load("python/3.7.9")
-load("ncarenv/1.3")
-load("intel/2022.1")
-load("mpt/2.25")
-load("ncarcompilers/0.5.0")
+unload("ncarenv/1.3")
+unload("intel/19.1.1")
+unload("ncarcompilers/0.5.0")
+unload("mpt/2.25")
+unload("netcdf/4.8.1")
 
-prepend_path("MODULEPATH", "/glade/work/epicufsrt/contrib/hpc-stack/intel2022.1/modulefiles/stack")
+prepend_path("MODULEPATH", "/glade/work/epicufsrt/contrib/spack-stack/cheyenne/spack-stack-1.4.1/envs/unified-env/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/glade/work/jedipara/cheyenne/spack-stack/modulefiles/misc")
 
-load("hpc/1.2.0")
-load("hpc-intel/2022.1")
-load("hpc-mpt/2.25")
-load("mkl/2022.1")
+local stack_python_ver=os.getenv("stack_python_ver") or "3.9.12"
+local stack_intel_ver=os.getenv("stack_intel_ver") or "19.1.1.217"
+local stack_mpi_ver=os.getenv("stack_mpi_ver") or "2019.7.217"
+local cmake_ver=os.getenv("cmake_ver") or "3.22.0"
 
-load("gsi_common")
+load(pathJoin("stack-intel", stack_intel_ver))
+load(pathJoin("stack-intel-mpi", stack_mpi_ver))
+load(pathJoin("stack-python", stack_python_ver))
+load(pathJoin("cmake", cmake_ver))
 
-load(pathJoin("prod_util", os.getenv("prod_util_ver") or "1.2.2"))
-pushenv("GSI_BINARY_SOURCE_DIR", "/glade/work/epicufsrt/contrib/GSI_data/fix/20230601")
+load("gsi_common")
 
 pushenv("CFLAGS", "-xHOST")
 pushenv("FFLAGS", "-xHOST")
 
+pushenv("GSI_BINARY_SOURCE_DIR", "/glade/work/epicufsrt/contrib/GSI_data/fix/20230601")
+
 whatis("Description: GSI environment on Cheyenne with Intel Compilers")

modulefiles/gsi_common.lua

@@ -2,22 +2,24 @@ help([[
 Load common modules to build GSI on all machines
 ]])
 
-local netcdf_ver=os.getenv("netcdf_ver") or "4.9.2"
+local netcdf_c_ver=os.getenv("netcdf_c_ver") or "4.9.2"
+local netcdf_fortran_ver=os.getenv("netcdf_fortran_ver") or "4.6.0"
 
-local bufr_ver=os.getenv("bufr_ver") or "12.0.0"
+local bufr_ver=os.getenv("bufr_ver") or "11.7.0"
 local bacio_ver=os.getenv("bacio_ver") or "2.4.1"
 local w3emc_ver=os.getenv("w3emc_ver") or "2.9.2"
 local sp_ver=os.getenv("sp_ver") or "2.3.3"
 local ip_ver=os.getenv("ip_ver") or "3.3.3"
 local sigio_ver=os.getenv("sigio_ver") or "2.3.2"
 local sfcio_ver=os.getenv("sfcio_ver") or "1.4.1"
-local nemsio_ver=os.getenv("nemsio_ver") or "2.5.4"
+local nemsio_ver=os.getenv("nemsio_ver") or "2.5.2"
 local wrf_io_ver=os.getenv("wrf_io_ver") or "1.2.0"
 local ncio_ver=os.getenv("ncio_ver") or "1.1.2"
 local crtm_ver=os.getenv("crtm_ver") or "2.4.0"
 local ncdiag_ver=os.getenv("ncdiag_ver") or "1.1.1"
 
-load(pathJoin("netcdf", netcdf_ver))
+load(pathJoin("netcdf-c", netcdf_c_ver))
+load(pathJoin("netcdf-fortran", netcdf_fortran_ver))
 
 load(pathJoin("bufr", bufr_ver))
 load(pathJoin("bacio", bacio_ver))
@@ -28,7 +30,7 @@ load(pathJoin("ip", ip_ver))
 load(pathJoin("sigio", sigio_ver))
 load(pathJoin("sfcio", sfcio_ver))
 load(pathJoin("nemsio", nemsio_ver))
-load(pathJoin("wrf_io", wrf_io_ver))
+load(pathJoin("wrf-io", wrf_io_ver))
 load(pathJoin("ncio", ncio_ver))
 load(pathJoin("crtm", crtm_ver))
 load(pathJoin("gsi-ncdiag",ncdiag_ver))

modulefiles/gsi_gaea.lua

@@ -1,33 +1,39 @@
 help([[
 ]])
 
-load("cmake/3.20.1")
+unload("intel")
+unload("cray-mpich")
+unload("cray-python")
+unload("darshan")
 
-prepend_path("MODULEPATH","/lustre/f2/dev/role.epic/contrib/hpc-stack/intel-classic-2022.0.2/modulefiles/stack")
-load(pathJoin("hpc", os.getenv("hpc_ver") or "1.2.0"))
+prepend_path("MODULEPATH", "/lustre/f2/dev/wpo/role.epic/contrib/spack-stack/spack-stack-1.4.1-c4/envs/unified-env/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/lustre/f2/pdata/esrl/gsd/spack-stack/modulefiles")
 
-load(pathJoin("intel-classic", os.getenv("intel_classic_ver") or "2022.0.2"))
-load(pathJoin("cray-mpich", os.getenv("cray_mpich_ver") or "7.7.20"))
-load(pathJoin("hpc-intel-classic", os.getenv("hpc_intel_classic_ver") or "2022.0.2"))
-load(pathJoin("hpc-cray-mpich", os.getenv("hpc_cray_mpich_ver") or "7.7.20"))
+local stack_python_ver=os.getenv("stack_python_ver") or "3.9.12"
+local stack_intel_ver=os.getenv("stack_intel_ver") or "2022.0.2"
+local stack_cray_mpich_ver=os.getenv("stack_cray_mpich_ver") or "7.7.20"
+local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
 
-load("gsi_common")
+load(pathJoin("stack-intel", stack_intel_ver))
+load(pathJoin("stack-cray-mpich", stack_cray_mpich_ver))
+load(pathJoin("stack-python", stack_python_ver))
+load(pathJoin("cmake", cmake_ver))
 
-local prod_util_ver=os.getenv("prod_util_ver") or "1.2.2"
-load(pathJoin("prod_util", prod_util_ver))
+load("gsi_common")
 
 -- Needed at runtime:
 load("alps")
 
 local MKLROOT="/opt/intel/oneapi/mkl/2022.0.2/"
 prepend_path("LD_LIBRARY_PATH",pathJoin(MKLROOT,"lib/intel64"))
+M
 pushenv("MKLROOT", MKLROOT)
 
 pushenv("GSI_BINARY_SOURCE_DIR", "/lustre/f2/dev/role.epic/contrib/GSI_data/fix/20230601")
 
 setenv("CC","cc")
-setenv("FC","ftn")
 setenv("CXX","CC")
+setenv("FC","ftn")
 pushenv("CRAYPE_LINK_TYPE","dynamic")
 
 whatis("Description: GSI environment on Gaea with Intel Compilers")

modulefiles/gsi_hera.gnu.lua

@@ -1,24 +1,23 @@
 help([[
 ]])
 
-prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/hpc-stack/libs/gnu-9.2/modulefiles/stack")
+prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.4.1/envs/unified-env/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/scratch1/NCEPDEV/jcsda/jedipara/spack-stack/modulefiles")
 
-local hpc_ver=os.getenv("hpc_ver") or "1.2.0"
-local hpc_gnu_ver=os.getenv("hpc_gnu_ver") or "9.2.0"
-local hpc_mpich_ver=os.getenv("hpc_mpich_ver") or "3.3.2"
-local cmake_ver=os.getenv("cmake_ver") or "3.20.1"
-local prod_util_ver=os.getenv("prod_util_ver") or "1.2.2"
+local stack_python_ver=os.getenv("stack_python_ver") or "3.9.12"
+local stack_gnu_ver=os.getenv("stack_gnu_ver") or "9.2.0"
+local stack_openmpi_ver=os.getenv("stack_openmpi_ver") or "4.1.5"
+local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
 
-load(pathJoin("hpc", hpc_ver))
-load(pathJoin("hpc-gnu", hpc_gnu_ver))
-load(pathJoin("hpc-mpich", hpc_mpich_ver))
+load(pathJoin("stack-gcc", stack_gnu_ver))
+load(pathJoin("stack-openmpi", stack_openmpi_ver))
+load(pathJoin("stack-python", stack_python_ver))
 load(pathJoin("cmake", cmake_ver))
 
 load("gsi_common")
 
-load(pathJoin("prod_util", prod_util_ver))
-
-pushenv("MKLROOT", "/apps/oneapi/mkl/2022.0.2")
+pushenv("CFLAGS", "-xHOST")
+pushenv("FFLAGS", "-xHOST")
 
 pushenv("GSI_BINARY_SOURCE_DIR", "/scratch1/NCEPDEV/global/glopara/fix/gsi/20230601")
 

modulefiles/gsi_hera.intel.lua

@@ -1,27 +1,20 @@
 help([[
 ]])
 
+prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.4.1/envs/unified-env/install/modulefiles/Core")
 prepend_path("MODULEPATH", "/scratch1/NCEPDEV/jcsda/jedipara/spack-stack/modulefiles")
-prepend_path("MODULEPATH", "/scratch1/NCEPDEV/stmp4/Cameron.Book/dave_gsi/envs/gsi_test/install/modulefiles/Core")
 
-local spack_python_ver=os.getenv("spack_python_ver") or "3.9.12"
-local spack_intel_ver=os.getenv("spack_intel_ver") or "2021.5.0"
-local spack_impi_ver=os.getenv("spack_impi_ver") or "2021.5.1"
-local spack_python_ver=os.getenv("spack_impi_ver") or "3.9.12"
-local ecflow_ver=os.getenv("ecflow_ver") or "5.5.3"
-local mysql_ver=os.getenv("mysql_ver") or "8.0.31"
+local stack_python_ver=os.getenv("stack_python_ver") or "3.9.12"
+local stack_intel_ver=os.getenv("stack_intel_ver") or "2021.5.0"
+local stack_impi_ver=os.getenv("stack_impi_ver") or "2021.5.1"
+local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
 
-load(pathJoin("miniconda", spack_python_ver))
-load(pathJoin("ecflow", ecflow_ver))
-load(pathJoin("mysql", mysql_ver))
-load(pathJoin("stack-intel", spack_intel_ver))
-load(pathJoin("stack-intel-oneapi-mpi", spack_impi_ver))
-load(pathJoin("stack-python", spack_python_ver))
+load(pathJoin("stack-intel", stack_intel_ver))
+load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))
+load(pathJoin("stack-python", stack_python_ver))
+load(pathJoin("cmake", cmake_ver))
 
-load("ufs-srw-app-env/unified-dev")
-load("gsi-ncdiag/1.1.1")
-load("ncio/1.1.2")
-load("bufr/12.0.0")
+load("gsi_common")
 
 pushenv("CFLAGS", "-xHOST")
 pushenv("FFLAGS", "-xHOST")

modulefiles/gsi_jet.lua

@@ -1,31 +1,24 @@
 help([[
 ]])
 
-prepend_path("MODULEPATH", "/mnt/lfs4/HFIP/hfv3gfs/role.epic/miniconda3/modulefiles")
-miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
-load(pathJoin("miniconda3", miniconda3_ver))
+prepend_path("MODULEPATH", "/mnt/lfs4/HFIP/hfv3gfs/role.epic/spack-stack/spack-stack-1.4.1/envs/unified-env/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/mnt/lfs4/HFIP/hfv3gfs/spack-stack/modulefiles")
 
-prepend_path("MODULEPATH", "/mnt/lfs4/HFIP/hfv3gfs/role.epic/hpc-stack/libs/intel-2022.1.2/modulefiles/stack")
+local stack_python_ver=os.getenv("stack_python_ver") or "3.9.12"
+local stack_intel_ver=os.getenv("stack_intel_ver") or "2021.5.0"
+local stack_impi_ver=os.getenv("stack_impi_ver") or "2021.5.1"
+local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
 
-local hpc_ver=os.getenv("hpc_ver") or "1.2.0"
-local hpc_intel_ver=os.getenv("hpc_intel_ver") or "2022.1.2"
-local hpc_impi_ver=os.getenv("hpc_impi_ver") or "2022.1.2"
-local cmake_ver=os.getenv("cmake_ver") or "3.20.1"
-local prod_util_ver=os.getenv("prod_util_ver") or "1.2.2"
-
-load(pathJoin("hpc", hpc_ver))
-load(pathJoin("hpc-intel", hpc_intel_ver))
-load(pathJoin("hpc-impi", hpc_impi_ver))
+load(pathJoin("stack-intel", stack_intel_ver))
+load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))
+load(pathJoin("stack-python", stack_python_ver))
 load(pathJoin("cmake", cmake_ver))
 
 load("gsi_common")
 
-load(pathJoin("prod_util", prod_util_ver))
-
 pushenv("CFLAGS", "-axSSE4.2,AVX,CORE-AVX2")
 pushenv("FFLAGS", "-axSSE4.2,AVX,CORE-AVX2")
 
-
 pushenv("GSI_BINARY_SOURCE_DIR", "/mnt/lfs4/HFIP/hfv3gfs/glopara/git/fv3gfs/fix/gsi/20230601")
 
 whatis("Description: GSI environment on Jet with Intel Compilers")

modulefiles/gsi_orion.lua

@@ -1,27 +1,21 @@
 help([[
 ]])
 
-prepend_path("MODULEPATH", "/work/noaa/epic-ps/role-epic-ps/miniconda3/modulefiles")
-miniconda3_ver=os.getenv("miniconda3_ver") or "4.12.0"
-load(pathJoin("miniconda3", miniconda3_ver))
+prepend_path("MODULEPATH", "/work/noaa/epic/role-epic/spack-stack/spack-stack-1.4.1/envs/unified-env/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/work/noaa/da/role-da/spack-stack/modulefiles")
 
-prepend_path("MODULEPATH", "/work/noaa/epic-ps/role-epic-ps/hpc-stack/libs/intel-2022.1.2/modulefiles/stack")
+local stack_python_ver=os.getenv("stack_python_ver") or "3.9.7"
+local stack_intel_ver=os.getenv("stack_intel_ver") or "2022.0.2"
+local stack_impi_ver=os.getenv("stack_impi_ver") or "2021.5.1"
+local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
 
-local hpc_ver=os.getenv("hpc_ver") or "1.2.0"
-local hpc_intel_ver=os.getenv("hpc_intel_ver") or "2022.1.2"
-local hpc_impi_ver=os.getenv("hpc_impi_ver") or "2022.1.2"
-local cmake_ver=os.getenv("cmake_ver") or "3.22.1"
-local prod_util_ver=os.getenv("prod_util_ver") or "1.2.2"
-
-load(pathJoin("hpc", hpc_ver))
-load(pathJoin("hpc-intel", hpc_intel_ver))
-load(pathJoin("hpc-impi", hpc_impi_ver))
+load(pathJoin("stack-intel", stack_intel_ver))
+load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))
+load(pathJoin("stack-python", stack_python_ver))
 load(pathJoin("cmake", cmake_ver))
 
 load("gsi_common")
 
-load(pathJoin("prod_util", prod_util_ver))
-
 pushenv("CFLAGS", "-xHOST")
 pushenv("FFLAGS", "-xHOST")
 

modulefiles/gsi_wcoss2.lua

@@ -1,22 +1,20 @@
 help([[
 ]])
 
-local PrgEnv_intel_ver=os.getenv("PrgEnv_intel_ver") or "8.1.0"
-local intel_ver=os.getenv("intel_ver") or "19.1.3.304"
-local craype_ver=os.getenv("craype_ver") or "2.7.8"
-local cray_mpich_ver=os.getenv("cray_mpich_ver") or "8.1.7"
-local cmake_ver= os.getenv("cmake_ver") or "3.20.2"
-local python_ver=os.getenv("python_ver") or "3.8.6"
-local prod_util_ver=os.getenv("prod_util_ver") or "2.0.10"
+prepend_path("MODULEPATH", "/lfs/h1/emc/nceplibs/noscrub/spack-stack/spack-stack-1.4.1/envs/unified-env/install/modulefiles/Core")
 
-load(pathJoin("PrgEnv-intel", PrgEnv_intel_ver))
-load(pathJoin("intel", intel_ver))
-load(pathJoin("craype", craype_ver))
-load(pathJoin("cray-mpich", cray_mpich_ver))
-load(pathJoin("cmake", cmake_ver))
-load(pathJoin("python", python_ver))
+load("stack-intel")
+load("stack-cray-mpich")
+load("stack-python")
 
-load(pathJoin("prod_util", prod_util_ver))
+--Avoid production installations; use spack-stack only:
+remove_path("MODULEPATH", "/apps/ops/prod/libs/modulefiles/compiler/intel/19.1.3.304")
+remove_path("MODULEPATH", "/apps/ops/prod/libs/modulefiles/mpi/intel/19.1.3.304/cray-mpich/8.1.4")
+remove_path("MODULEPATH", "/apps/ops/prod/libs/modulefiles/mpi/intel/19.1.3.304/cray-mpich/8.1.7")
+remove_path("MODULEPATH", "/apps/prod/lmodules/intel/19.1.3.304")
+remove_path("MODULEPATH", "/apps/prod/lmodules/INTEL_cray_mpich/19.1.3.304/cray-mpich/8.1.4")
+
+load("cmake")
 
 load("gsi_common")