Built site for gh-pages

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+83fb88b5

contribute/core.html

@@ -308,8 +308,11 @@ <h2 data-number="2.2" class="anchored" data-anchor-id="render-documentation"><sp
 <p>The Python API reference is created using quartodoc by running this command from the <code>docs/</code> folder:</p>
 <div class="sourceCode" id="cb8"><pre class="sourceCode bash code-with-copy"><code class="sourceCode bash"><span id="cb8-1"><a href="#cb8-1" aria-hidden="true" tabindex="-1"></a><span class="ex">quartodoc</span> build</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <p>You typically only have to run this once, or if you want to check out how it looks after changing Python docstrings.</p>
+<p>The Julia API reference is created using Documenter.jl by running this command from the <code>docs/</code> folder:</p>
+<div class="sourceCode" id="cb9"><pre class="sourceCode bash code-with-copy"><code class="sourceCode bash"><span id="cb9-1"><a href="#cb9-1" aria-hidden="true" tabindex="-1"></a><span class="ex">julia</span> <span class="at">--project</span> <span class="at">-e</span> <span class="st">"using Pkg; Pkg.instantiate()"</span>  <span class="co"># needed once</span></span>
+<span id="cb9-2"><a href="#cb9-2" aria-hidden="true" tabindex="-1"></a><span class="ex">julia</span> <span class="at">--project</span> make.jl  <span class="co"># after changing the Julia docstrings</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <p>In order to preview documentation you can run the following command from the <code>docs/</code> folder. Afterwards, a browser tab will open with the rendered documentation, updating it as you make changes.</p>
-<div class="sourceCode" id="cb9"><pre class="sourceCode bash code-with-copy"><code class="sourceCode bash"><span id="cb9-1"><a href="#cb9-1" aria-hidden="true" tabindex="-1"></a><span class="ex">quarto</span> preview</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
+<div class="sourceCode" id="cb10"><pre class="sourceCode bash code-with-copy"><code class="sourceCode bash"><span id="cb10-1"><a href="#cb10-1" aria-hidden="true" tabindex="-1"></a><span class="ex">quarto</span> preview</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <p>The documentation also includes <a href="https://jupyter.org/">Jupyter notebooks</a>. Note that they are stored in the repository without any output, and this should stay this way to keep the repository small. The documentation rendering process adds the output by running the notebooks.</p>
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@@ -328,10 +331,10 @@ <h2 data-number="2.2" class="anchored" data-anchor-id="render-documentation"><sp
 <section id="run-ribasim-simulations" class="level2" data-number="2.3">
 <h2 data-number="2.3" class="anchored" data-anchor-id="run-ribasim-simulations"><span class="header-section-number">2.3</span> Run Ribasim simulations</h2>
 <p>Assuming your working directory is the root of the repository, you can activate this project by entering the Pkg mode of the REPL with <code>]</code> and execute:</p>
-<div class="sourceCode" id="cb10"><pre class="sourceCode julia code-with-copy"><code class="sourceCode julia"><span id="cb10-1"><a href="#cb10-1" aria-hidden="true" tabindex="-1"></a>pkg<span class="op">&gt;</span> activate core</span>
-<span id="cb10-2"><a href="#cb10-2" aria-hidden="true" tabindex="-1"></a>pkg<span class="op">&gt;</span> instantiate</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
+<div class="sourceCode" id="cb11"><pre class="sourceCode julia code-with-copy"><code class="sourceCode julia"><span id="cb11-1"><a href="#cb11-1" aria-hidden="true" tabindex="-1"></a>pkg<span class="op">&gt;</span> activate core</span>
+<span id="cb11-2"><a href="#cb11-2" aria-hidden="true" tabindex="-1"></a>pkg<span class="op">&gt;</span> instantiate</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <p>Press backspace to go back to the Julia REPL. There you can run a model with:</p>
-<div class="sourceCode" id="cb11"><pre class="sourceCode julia code-with-copy"><code class="sourceCode julia"><span id="cb11-1"><a href="#cb11-1" aria-hidden="true" tabindex="-1"></a>julia<span class="op">&gt;</span> Ribasim.<span class="fu">run</span>(<span class="st">"path/to/model.toml"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
+<div class="sourceCode" id="cb12"><pre class="sourceCode julia code-with-copy"><code class="sourceCode julia"><span id="cb12-1"><a href="#cb12-1" aria-hidden="true" tabindex="-1"></a>julia<span class="op">&gt;</span> Ribasim.<span class="fu">run</span>(<span class="st">"path/to/model.toml"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
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core/equations.html

@@ -49,6 +49,7 @@
 <script src="../site_libs/quarto-search/fuse.min.js"></script>
 <script src="../site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="../">
+<link href="../build/index.html" rel="next">
 <link href="../core/usage.html" rel="prev">
 <script src="../site_libs/quarto-html/quarto.js"></script>
 <script src="../site_libs/quarto-html/popper.min.js"></script>
@@ -173,6 +174,12 @@
   <a href="../core/equations.html" class="sidebar-item-text sidebar-link active">
  <span class="menu-text">Equations</span></a>
   </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../build/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">API Reference</span></a>
+  </div>
 </li>
     </ul>
     </div>
@@ -762,6 +769,9 @@ <h1 data-number="5"><span class="header-section-number">5</span> Performance</h1
       </a>          
   </div>
   <div class="nav-page nav-page-next">
+      <a href="../build/index.html" class="pagination-link">
+        <span class="nav-page-text">API Reference</span> <i class="bi bi-arrow-right-short"></i>
+      </a>
   </div>
 </nav>
 </div> <!-- /content -->

core/index.html

@@ -152,6 +152,12 @@
   <a href="../core/equations.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Equations</span></a>
   </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../build/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">API Reference</span></a>
+  </div>
 </li>
     </ul>
     </div>

core/usage.html

@@ -189,6 +189,12 @@
   <a href="../core/equations.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Equations</span></a>
   </div>
+</li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../build/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">API Reference</span></a>
+  </div>
 </li>
     </ul>
     </div>

python/examples.html

@@ -554,7 +554,7 @@ <h1 data-number="2"><span class="header-section-number">2</span> Update the basi
 <span id="cb26-4"><a href="#cb26-4" aria-hidden="true" tabindex="-1"></a>ax <span class="op">=</span> df_flow.pivot_table(index<span class="op">=</span><span class="st">"time"</span>, columns<span class="op">=</span><span class="st">"edge"</span>, values<span class="op">=</span><span class="st">"flow_m3d"</span>).plot()</span>
 <span id="cb26-5"><a href="#cb26-5" aria-hidden="true" tabindex="-1"></a>ax.legend(bbox_to_anchor<span class="op">=</span>(<span class="fl">1.3</span>, <span class="dv">1</span>), title<span class="op">=</span><span class="st">"Edge"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <div class="cell-output cell-output-display" data-execution_count="26">
-<pre><code>&lt;matplotlib.legend.Legend at 0x7f0018f45490&gt;</code></pre>
+<pre><code>&lt;matplotlib.legend.Legend at 0x7f63609a81d0&gt;</code></pre>
 </div>
 <div class="cell-output cell-output-display">
 <p><img src="examples_files/figure-html/cell-27-output-2.png" width="727" height="412"></p>