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Update generate-topo-file.md #6980

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Feb 13, 2025
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Update generate-topo-file.md #6980

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16 changes: 9 additions & 7 deletions ...dding-grid-support/adding-grid-support-step-by-step-guide/generate-topo-file.md
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Original file line number Diff line number Diff line change
Expand Up @@ -40,10 +40,12 @@
```shell
# Set the machine specific environment
cd ${e3sm_root}/components/homme
${e3sm_root}/cime/CIME/scripts/configure && source .env_mach_specific.sh

# load the appropriate machine environment
eval $(${e3sm_root}/cime/CIME/Tools/get_case_env)

# Specify machine configuration file
mach_file=${e3sm_root}/components/homme/cmake/machineFiles/perlmutter-gnu.cmake
mach_file=${e3sm_root}/components/homme/cmake/machineFiles/pm-cpu.cmake
# mach_file=${e3sm_root}/components/homme/cmake/machineFiles/chrysalis.cmake

cmake -C ${mach_file} \
Expand All @@ -65,12 +67,12 @@

### Building cube_to_target

The following commands were working on both Perlmutter/NERSC and Chrysalis/LCRC machines as of 2024.
The following commands were working on both Perlmutter/NERSC and Chrysalis/LCRC machines as of 2025.

Check notice on line 70 in docs/dev-guide/adding-grid-support/adding-grid-support-step-by-step-guide/generate-topo-file.md

View check run for this annotation

Codacy Production / Codacy Static Code Analysis

docs/dev-guide/adding-grid-support/adding-grid-support-step-by-step-guide/generate-topo-file.md#L70 

Expected: 80; Actual: 100

```shell
cd ${e3sm_root}/components/eam/tools/topo_tool/cube_to_target

${e3sm_root}/cime/CIME/scripts/configure && source .env_mach_specific.sh
eval $(${e3sm_root}/cime/CIME/Tools/get_case_env)

make
```
Expand Down Expand Up @@ -228,7 +230,7 @@

```shell
cd ${e3sm_root}/components/homme
${e3sm_root}/cime/CIME/scripts/configure && source .env_mach_specific.sh
eval $(${e3sm_root}/cime/CIME/Tools/get_case_env)

cat <<EOF > input.nl
&ctl_nl
Expand Down Expand Up @@ -390,7 +392,7 @@
#---------------------------------------------------------------------------
# Apply Smoothing
cd ${e3sm_root}/components/homme
${e3sm_root}/cime/CIME/scripts/configure && source .env_mach_specific.sh
eval $(${e3sm_root}/cime/CIME/Tools/get_case_env)
# Create namelist file for HOMME
cat <<EOF > input.nl
&ctl_nl
Expand Down Expand Up @@ -555,7 +557,7 @@
#---------------------------------------------------------------------------
# Apply Smoothing
cd ${e3sm_root}/components/homme
${e3sm_root}/cime/CIME/scripts/configure && source .env_mach_specific.sh
eval $(${e3sm_root}/cime/CIME/Tools/get_case_env)
# Create namelist file for HOMME
cat <<EOF > input.nl
&ctl_nl
Expand Down