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Add a script to generate/edit output stream yaml files #2727

Merged
merged 18 commits into from
Mar 13, 2024
Merged

Add a script to generate/edit output stream yaml files #2727

merged 18 commits into from
Mar 13, 2024

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bartgol
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@bartgol bartgol commented Feb 22, 2024

This script allows to create and edit output yaml files via scripting. The main reason for this PR is to be able to create testmods that add/edit output streams for our nightly testing, avoiding the combinatorial explosion due to all the possible output stream options.

So far I added support for the basic options, but I still need to add the not-so-commonly-used ones, like fp precision or restart power-user options.

@bartgol bartgol added AT: AUTOMERGE Inform the autotester (AT) that it can merge this PR if reviewers approved, and tests pass AT: WIP Inform the autotester (AT) that the PR is a work in progress, and should not be tested scripts AT: Skip weaver Do not run AT testing on weaver for this PR AT: Skip Stand-Alone Testing Do not run SCREAM internal unit tests for AT runs AT: Skip v1 Testing Do not run v1 CIME-based tests for AT runs Quality of Life labels Feb 22, 2024
@bartgol bartgol self-assigned this Feb 22, 2024
@bartgol bartgol removed AT: WIP Inform the autotester (AT) that the PR is a work in progress, and should not be tested AT: Skip v1 Testing Do not run v1 CIME-based tests for AT runs labels Feb 23, 2024
@bartgol bartgol force-pushed the bartgol/eamxx/output-stream-edit-script branch from 228bf29 to 1731f89 Compare February 23, 2024 22:40
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on branch gh-pages at 2024-03-13 17:41 UTC

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bartgol commented Feb 23, 2024

@AaronDonahue @jgfouca This PR does quite a few changes, and I'm open to break it apart if you feel like it. Let me summarize them here

  • Add a script to generate/edit an output yaml file. It does not support all the options available (e.g., no support for file max snapshots, or for power-user restart options), but it is definitely enough for our testing purposes
  • Add a bunch of testmods, which create different output configurations. I basically have 3 streams: dyn, phys, diags. Other testmods can set average avg type, horiz, or vert remap. I added a bunch of fields to the streams, but probably could add more. @AaronDonahue , feel free to suggest more.
  • I added some "preset" testmods, which combine the testmods above, for a variety of output configurations. They are not exhaustive, but definitely an improvement w.r.t. what we had. Right now there are 6 presets. I don't think we should add more, cause we don't have enough tests to use more than those. If we think there has to be more stress-testing, we can make the presets more diverse, so that we test more configs with those 6 testmods.
  • I removed the default output yaml. By default, scream generates no output, unless told to do so. I find it clearer than just shoving all possible fields in a single file. Prod runs all use their own sets of yaml files anyways...
  • The above led me to a nano fix to atm_manip, when it comes to appending an option to an empty node.

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jgfouca
jgfouca approved these changes Mar 8, 2024
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This looks great!

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@bartgol , I think this is ready to merge. Do you think it makes sense to rebase off of master since the last round of AT is about a week old?

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bartgol commented Mar 13, 2024

@bartgol , I think this is ready to merge. Do you think it makes sense to rebase off of master since the last round of AT is about a week old?

Yeah, def needs a rebase and another round of testing.

@bartgol
EAMxx: add a script to generate/edit output stream yaml files
3211c23
@bartgol
EAMxx: add doctest to edit-output-stream scripts
3d2ba5c
@bartgol
EAMxx: allow to set freq/freq-units via CIME vars in edit-output-stream
b92bfc3
@bartgol
EAMxx: fix corner case usage in atm_manip.py
3927efd 
When appending to an empty array, avoid leading ','
@bartgol
EAMxx: add more support to edit-output-stream script
c11f771 
* Make some params case insensitive
* Add arg for filename prefix
@bartgol
EAMxx: use no output stream by default
667caa5
@bartgol
EAMxx: add hierarchy of testmods for different model output
4a3f159
@bartgol
EAMxx: remove outdate README file for scream yaml files
839b1a4
@bartgol
Set different output presets for scream cime tests
467a0eb
@bartgol
EAMxx: avoid confusion in output testmods related to different env va…
61f43aa 
…rs names

YAML_GEN and YAML_EDIT were both referring to the same script,
so use a single env var
@bartgol
EAMxx: change the dyn testmod to phys_dyn, to have 2 grids in same st…
b460a2b 
…ream
@bartgol
EAMxx: fix upper/lower case issues in edit-output-stream script
c16d93a
@bartgol
EAMxx: fix testmods for output
f355aa2
@bartgol
EAMxx: change cime vars accepted by edit-output-stream
2ee80f2 
Do not accept STOP_N/STOP_OPTION. These *do* change in an ERP/ERS test.
Besides, these refer to when the run should stop, not when the output
should be written.

Instead, use HIST_N/HIST_OPTION, which are the same across both runs
of an ERP/ERS test.
@bartgol
EAMxx: add option in I/O to skip t=t0 output (for avg=INSTANT)
572f50d
@bartgol
EAMxx: allow INSTANT output in ERS/ERP tests, but without t0 output
c068a42
@bartgol
EAMxx: use a better vremap map file for output testmods
3ab9a0f
@bartgol
EAMxx: fix name of yaml file entry in buildnml
9a0c6f8
@bartgol bartgol force-pushed the bartgol/eamxx/output-stream-edit-script branch from 1a7ad5b to 9a0c6f8 Compare March 13, 2024 17:39
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Finished MODEL_BUILD for test ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5 in 149.765156 seconds (PASS)
Starting RUN for test ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5 with 1 proc on interactive node and 64 procs on compute nodes
Finished RUN for test ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5 in 0.855272 seconds (PEND). [COMPLETED 2 of 6]
Finished MODEL_BUILD for test ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2 in 214.882289 seconds (PASS)
Starting RUN for test ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2 with 1 proc on interactive node and 64 procs on compute nodes
Finished RUN for test ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2 in 8.190067 seconds (PEND). [COMPLETED 3 of 6]
Finished MODEL_BUILD for test PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 in 239.697882 seconds (PASS)
Starting RUN for test PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 with 1 proc on interactive node and 64 procs on compute nodes
Finished RUN for test PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 in 5.313749 seconds (PEND). [COMPLETED 4 of 6]
Finished MODEL_BUILD for test ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 in 392.081091 seconds (PASS)
Starting RUN for test ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 with 1 proc on interactive node and 64 procs on compute nodes
Finished RUN for test ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 in 1.060544 seconds (PEND). [COMPLETED 5 of 6]
Finished MODEL_BUILD for test ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4 in 437.680000 seconds (PASS)
Starting RUN for test ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4 with 1 proc on interactive node and 64 procs on compute nodes
Finished RUN for test ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4 in 1.197681 seconds (PEND). [COMPLETED 6 of 6]
Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1.C.20240313_132607_h09cmz
DIFF ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4.C.20240313_132607_h09cmz
DIFF ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5.C.20240313_132607_h09cmz
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2.C.20240313_132607_h09cmz
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1.C.20240313_132607_h09cmz
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu9.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu9.scream-output-preset-3.C.20240313_132607_h09cmz
test-scheduler took 678.3807277679443 seconds'
+ errors='Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1.C.20240313_132607_h09cmz
DIFF ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4.C.20240313_132607_h09cmz
DIFF ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5.C.20240313_132607_h09cmz
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2.C.20240313_132607_h09cmz
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1.C.20240313_132607_h09cmz
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu9.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu9.scream-output-preset-3.C.20240313_132607_h09cmz
test-scheduler took 678.3807277679443 seconds'
+ V1_FAILURES_DETAILS+='Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1.C.20240313_132607_h09cmz
DIFF ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4.C.20240313_132607_h09cmz
DIFF ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5.C.20240313_132607_h09cmz
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2.C.20240313_132607_h09cmz
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1.C.20240313_132607_h09cmz
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu9.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu9.scream-output-preset-3.C.20240313_132607_h09cmz
test-scheduler took 678.3807277679443 seconds'
+ set +x
######################################################
FAILS DETECTED:
  SCREAM V1 TESTING FAILED!
Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1.C.20240313_132607_h09cmz
DIFF ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-4.C.20240313_132607_h09cmz
DIFF ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-rad_frequency_2--scream-output-preset-5.C.20240313_132607_h09cmz
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu9.scream-output-preset-2.C.20240313_132607_h09cmz
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu9.scream-output-preset-1.C.20240313_132607_h09cmz
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu9.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu9.scream-output-preset-3.C.20240313_132607_h09cmz
test-scheduler took 678.3807277679443 seconds
  SCREAM SCRIPTS TESTING FAILED!
######################################################
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 89936 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script  : #!/bin/bash -le

cd $WORKSPACE/${BUILD_ID}/


./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh


We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs


squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel


[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins7637840908214460147.sh

POST BUILD TASK : SUCCESS

END OF POST BUILD TASK : 0

Sending e-mails to: [email protected]

Finished: FAILURE
SCREAM_PullRequest_Autotester_Weaver # 5414 PASSED (click to see last 100 lines of console output) 

101/115 Test #101: create_vert_remap_and_weights ...........................   Passed    0.76 sec
        Start 102: shoc_p3_source
102/115 Test #102: shoc_p3_source ..........................................   Passed    2.49 sec
        Start 103: shoc_p3_nudged
103/115 Test #103: shoc_p3_nudged ..........................................   Passed    1.96 sec
        Start 104: shoc_p3_nudged_remapped
104/115 Test #104: shoc_p3_nudged_remapped .................................   Passed    1.81 sec
        Start 105: shoc_p3_nudging_glob_novert
105/115 Test #105: shoc_p3_nudging_glob_novert .............................   Passed    1.92 sec
        Start 106: homme_shoc_cld_p3_rrtmgp_np1
106/115 Test #106: homme_shoc_cld_p3_rrtmgp_np1 ............................   Passed    4.25 sec
        Start 107: homme_shoc_cld_p3_rrtmgp_pg2_np1
107/115 Test #107: homme_shoc_cld_p3_rrtmgp_pg2_np1 ........................   Passed    4.25 sec
        Start 108: model_baseline
108/115 Test #108: model_baseline ..........................................   Passed    5.21 sec
        Start 109: model_initial
109/115 Test #109: model_initial ...........................................   Passed    4.26 sec
        Start 110: model_restart
110/115 Test #110: model_restart ...........................................   Passed    5.02 sec
        Start 111: restarted_vs_monolithic_check_np1
111/115 Test #111: restarted_vs_monolithic_check_np1 .......................   Passed    0.08 sec
        Start 112: homme_shoc_cld_spa_p3_rrtmgp_np1
112/115 Test #112: homme_shoc_cld_spa_p3_rrtmgp_np1 ........................   Passed    5.73 sec
        Start 113: homme_shoc_cld_spa_p3_rrtmgp_128levels_np1
113/115 Test #113: homme_shoc_cld_spa_p3_rrtmgp_128levels_np1 ..............   Passed    5.61 sec
        Start 114: homme_shoc_cld_spa_p3_rrtmgp_128levels_tend_check_np1
114/115 Test #114: homme_shoc_cld_spa_p3_rrtmgp_128levels_tend_check_np1 ...   Passed    1.07 sec
        Start 115: homme_shoc_cld_spa_p3_rrtmgp_dp_np1
115/115 Test #115: homme_shoc_cld_spa_p3_rrtmgp_dp_np1 .....................   Passed   18.76 sec

100% tests passed, 0 tests failed out of 110


Label Time Summary:

bfbhash             =   0.97 secproc (1 test)

check               =   0.74 secproc (1 test)

cld                 =  46.49 secproc (8 tests)

cld_fraction        =   3.00 secproc (1 test)

cosp                =   1.86 secproc (1 test)

diagnostics         =  34.93 secproc (18 tests)

dp                  =  18.76 secproc (1 test)

driver              =  71.74 secproc (18 tests)

dynamics            =  47.44 secproc (9 tests)

fail                =  82.64 secproc (4 tests)

io                  =  31.98 secproc (12 tests)

nudging             =   5.92 secproc (2 tests)

p3                  = 254.17 secproc (15 tests)

p3_sk               = 175.50 secproc (2 tests)

pg2                 =   4.25 secproc (1 test)

physics             = 526.32 secproc (33 tests)

remap               =   3.22 secproc (1 test)

rrtmgp              =  68.87 secproc (14 tests)

shoc                = 109.64 secproc (15 tests)

spa                 =  36.11 secproc (7 tests)

surface_coupling    =   1.57 secproc (1 test)

tms                 =   4.25 secproc (1 test)


Total Test time (real) = 778.14 sec


The following tests did not run:

30 - physics_saturation_baseline_fake (Disabled)

38 - p3_baseline_f90_fake (Disabled)

39 - p3_baseline_cxx_fake (Disabled)

46 - shoc_baseline_f90_fake (Disabled)

47 - shoc_baseline_cxx_fake (Disabled)


Testing '''9a0c6f814da09e6abf7df609f092af6b51062a55''' for test '''release'''


RUN: taskset -c 104-155 sh -c '''SCREAM_BUILD_PARALLEL_LEVEL=52 CTEST_PARALLEL_LEVEL=1 ctest -V --output-on-failure --resource-spec-file /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/release/ctest_resource_file.json -DNO_SUBMIT=True -DBUILD_WORK_DIR=/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/release -DBUILD_NAME_MOD=release -S /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/cmake/ctest_script.cmake -DCTEST_SITE=weaver -DCMAKE_COMMAND="-C /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/cmake/machine-files/weaver.cmake -DNetCDF_Fortran_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-fortran/4.6.0/gcc/11.3.0/openmpi/4.1.4/5ka6asw -DNetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-c/4.9.0/gcc/11.3.0/openmpi/4.1.4/mdd6fth -DCMAKE_BUILD_TYPE=Release -DEKAT_DISABLE_TPL_WARNINGS='''''''''ON''''''''' -DCMAKE_CXX_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpicxx -DCMAKE_C_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpicc -DCMAKE_Fortran_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpifort -DSCREAM_DYNAMICS_DYCORE=HOMME -DSCREAM_TEST_MAX_TOTAL_THREADS=1 -DSCREAM_TEST_DATA_DIR=/home/projects/e3sm/scream/pr-autotester/master-baselines/weaver/release/data" '''

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/release


Testing '''9a0c6f814da09e6abf7df609f092af6b51062a55''' for test '''full_sp_debug'''


RUN: taskset -c 52-103 sh -c '''SCREAM_BUILD_PARALLEL_LEVEL=52 CTEST_PARALLEL_LEVEL=1 ctest -V --output-on-failure --resource-spec-file /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/full_sp_debug/ctest_resource_file.json -DNO_SUBMIT=True -DBUILD_WORK_DIR=/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/full_sp_debug -DBUILD_NAME_MOD=full_sp_debug -S /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/cmake/ctest_script.cmake -DCTEST_SITE=weaver -DCMAKE_COMMAND="-C /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/cmake/machine-files/weaver.cmake -DNetCDF_Fortran_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-fortran/4.6.0/gcc/11.3.0/openmpi/4.1.4/5ka6asw -DNetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-c/4.9.0/gcc/11.3.0/openmpi/4.1.4/mdd6fth -DCMAKE_BUILD_TYPE=Debug -DEKAT_DEFAULT_BFB=True -DSCREAM_DOUBLE_PRECISION=False -DEKAT_DISABLE_TPL_WARNINGS='''''''''ON''''''''' -DCMAKE_CXX_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpicxx -DCMAKE_C_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpicc -DCMAKE_Fortran_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpifort -DSCREAM_DYNAMICS_DYCORE=HOMME -DSCREAM_TEST_MAX_TOTAL_THREADS=1 -DSCREAM_TEST_DATA_DIR=/home/projects/e3sm/scream/pr-autotester/master-baselines/weaver/full_sp_debug/data" '''

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/full_sp_debug


Testing '''9a0c6f814da09e6abf7df609f092af6b51062a55''' for test '''full_debug'''


RUN: taskset -c 0-51 sh -c '''SCREAM_BUILD_PARALLEL_LEVEL=52 CTEST_PARALLEL_LEVEL=1 ctest -V --output-on-failure --resource-spec-file /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/full_debug/ctest_resource_file.json -DNO_SUBMIT=True -DBUILD_WORK_DIR=/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/full_debug -DBUILD_NAME_MOD=full_debug -S /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/cmake/ctest_script.cmake -DCTEST_SITE=weaver -DCMAKE_COMMAND="-C /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/cmake/machine-files/weaver.cmake -DNetCDF_Fortran_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-fortran/4.6.0/gcc/11.3.0/openmpi/4.1.4/5ka6asw -DNetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-c/4.9.0/gcc/11.3.0/openmpi/4.1.4/mdd6fth -DCMAKE_BUILD_TYPE=Debug -DEKAT_DEFAULT_BFB=True -DEKAT_DISABLE_TPL_WARNINGS='''''''''ON''''''''' -DCMAKE_CXX_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpicxx -DCMAKE_C_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpicc -DCMAKE_Fortran_COMPILER=/projects/ppc64le-pwr9-rhel8/tpls/openmpi/4.1.4/gcc/11.3.0/base/vu2aei6/bin/mpifort -DSCREAM_DYNAMICS_DYCORE=HOMME -DSCREAM_TEST_MAX_TOTAL_THREADS=1 -DSCREAM_TEST_DATA_DIR=/home/projects/e3sm/scream/pr-autotester/master-baselines/weaver/full_debug/data" '''

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx/ctest-build/full_debug

OVERALL STATUS: PASS

Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -c EKAT_DISABLE_TPL_WARNINGS=ON -p -i -m weaver

RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -c EKAT_DISABLE_TPL_WARNINGS=ON -p -i -m weaver

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5414/scream/components/eamxx

Completed analysis on weaver'


    

  • [[ 0 != 0 ]]
    • 

  • [[ 1 == 0 ]]
    • 

  • [[ weaver == \m\a\p\p\y ]]
    • 

  • set +x
    
Performing Post build task...
    
Match found for : : True
    
Logical operation result is TRUE
    
Running script  : #!/bin/bash -le
    • 



cd $WORKSPACE/${BUILD_ID}/


./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh

[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins13251625737252183422.sh

POST BUILD TASK : SUCCESS

END OF POST BUILD TASK : 0

Finished: SUCCESS

@bartgol
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bartgol commented Mar 13, 2024

Since Jim already approved before the rebsae and the only fails are diffs due to missing baselines, I'm going to merge this.

@bartgol bartgol merged commit 4f13c83 into master Mar 13, 2024
13 of 14 checks passed
@bartgol bartgol deleted the bartgol/eamxx/output-stream-edit-script branch March 13, 2024 20:58
@AaronDonahue AaronDonahue mentioned this pull request Mar 21, 2024
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@jgfouca jgfouca jgfouca approved these changes

@AaronDonahue AaronDonahue Awaiting requested review from AaronDonahue

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@bartgol bartgol

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@bartgol @E3SM-Autotester @AaronDonahue @jgfouca