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gihanpanapitiya patch 1 #95

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Commits on Dec 23, 2022

  1. Simplify PID handling

    j-woz committed Dec 23, 2022
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  2. Update Swift/T for Polaris

    j-woz committed Dec 23, 2022
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  4. Spelling

    j-woz committed Dec 23, 2022
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  5. Fix header

    j-woz committed Dec 23, 2022
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  6. Better PARAM_SET_FILE handling

    j-woz committed Dec 23, 2022
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  8. Initial test for GraphDRP

    j-woz committed Dec 23, 2022
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  9. Clean up and support IMPROVE

    j-woz committed Dec 23, 2022
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  11. Fix header

    j-woz committed Dec 23, 2022
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  12. Fix PPN for single-node runs

    j-woz committed Dec 23, 2022
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  13. Clean up

    j-woz committed Dec 23, 2022
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  14. Add node/rank log model.log

    j-woz committed Dec 23, 2022
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  15. Add better mlrMBO output

    j-woz committed Dec 23, 2022
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  16. Fix comments

    j-woz committed Dec 23, 2022
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Commits on Dec 31, 2022

  1. Make GDRP a little bigger

    Rajeev Jain committed Dec 31, 2022
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Commits on Jan 9, 2023

  1. Move APP_PYTHONPATH logic

    j-woz committed Jan 9, 2023
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Commits on Jan 11, 2023

  1. o working version on lambda0

    rajeeja committed Jan 11, 2023
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  2. Configure EQ-Py on Lambda

    j-woz committed Jan 11, 2023
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  4. o Changes for GA

    rajeeja committed Jan 11, 2023
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Commits on Jan 12, 2023

  1. Initial CANDLE-compliant model

    j-woz committed Jan 12, 2023
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  2. First model call works

    j-woz committed Jan 12, 2023
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Commits on Jan 13, 2023

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Commits on Jan 15, 2023

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Commits on Jan 17, 2023

  1. o GA problem for Polaris GraphDRP

    Rajeev Jain committed Jan 17, 2023
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Commits on Jan 18, 2023

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  2. Update header

    j-woz committed Jan 18, 2023
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  3. Shorten job name to fit for PBS

    j-woz committed Jan 18, 2023
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Commits on Jan 19, 2023

  1. o Add One D test model

    o Fix format
    rajeeja committed Jan 19, 2023
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  2. o Bigger GraphDRP HPO setup

    Rajeev Jain committed Jan 19, 2023
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Commits on Jan 20, 2023

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Commits on Jan 24, 2023

  1. o Working version of oneD, needed to remove impute.y.fun and transfor…

    …mation function for MBOExampleRun, they might need to be reintroduced.
    rajeeja committed Jan 24, 2023
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  3. Report critical paths

    j-woz committed Jan 24, 2023
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  4. o Add python settings

    rajeeja committed Jan 24, 2023
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Commits on Jan 25, 2023

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Commits on Feb 7, 2023

  1. Merge in branch jpg_crusher

    j-woz committed Feb 7, 2023
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Commits on Feb 8, 2023

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  2. Clean up comments

    j-woz committed Feb 8, 2023
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  5. Attempt to fix error capture

    j-woz committed Feb 8, 2023
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Commits on Feb 13, 2023

  1. Add more comments, etc.

    j-woz committed Feb 13, 2023
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  2. Better log parsing

    j-woz committed Feb 13, 2023
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Commits on Feb 14, 2023

  1. WIP Comparator

    j-woz committed Feb 14, 2023
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  2. Basic Crusher tests

    j-woz committed Feb 14, 2023
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  3. Settings for Crusher

    j-woz committed Feb 14, 2023
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  4. New utility scripts

    j-woz committed Feb 14, 2023
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Commits on Feb 15, 2023

  1. Add usage note

    j-woz committed Feb 15, 2023
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  2. Check for python

    j-woz committed Feb 15, 2023
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  3. Fix output file location

    j-woz committed Feb 15, 2023
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Commits on Feb 16, 2023

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  2. Document node selection

    j-woz committed Feb 16, 2023
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  4. Handle user error

    j-woz committed Feb 16, 2023
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Commits on Feb 17, 2023

  1. Fix comment

    j-woz committed Feb 17, 2023
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  2. Quick restart example

    j-woz committed Feb 17, 2023
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  3. WS

    j-woz committed Feb 17, 2023
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  4. Zero-pad node IDs

    j-woz committed Feb 17, 2023
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  5. Remove debug output

    j-woz committed Feb 17, 2023
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Commits on Feb 20, 2023

  1. Fix parent weights location

    j-woz committed Feb 20, 2023
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Commits on Feb 21, 2023

  1. Drop obj_prio()

    j-woz committed Feb 21, 2023
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  2. Log the result from model.sh

    j-woz committed Feb 21, 2023
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  5. Fix out-*.txt if not on Summit

    j-woz committed Feb 21, 2023
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  6. Better error handling

    j-woz committed Feb 21, 2023
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  7. Simple test for Lambda

    j-woz committed Feb 21, 2023
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Commits on Feb 22, 2023

  1. Draft settings for Frontier

    j-woz committed Feb 22, 2023
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  2. Drop reference to EQR here

    j-woz committed Feb 22, 2023
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  3. Fix bad merge

    j-woz committed Feb 22, 2023
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  4. Add PY for Frontier

    j-woz committed Feb 22, 2023
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  5. Fix obj_py() for iter_indiv_id

    j-woz committed Feb 22, 2023
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  6. Fix bad merge

    j-woz committed Feb 22, 2023
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  7. Turn off UNBUFFERED

    j-woz committed Feb 22, 2023
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Commits on Feb 23, 2023

  1. Fixes for Frontier

    j-woz committed Feb 23, 2023
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  2. Fixes for Frontier

    j-woz committed Feb 23, 2023
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  3. Default to 1 hour walltime

    j-woz committed Feb 23, 2023
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Commits on Feb 25, 2023

  1. Set GPUs

    j-woz committed Feb 25, 2023
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  2. Add Uno to PYTHONPATH

    j-woz committed Feb 25, 2023
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  3. PYTHONPATH setting for Frontier

    j-woz committed Feb 25, 2023
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  4. Add warning message

    j-woz committed Feb 25, 2023
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  5. Use smaller job name

    j-woz committed Feb 25, 2023
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  7. Record new PLAN_JSON

    j-woz committed Feb 25, 2023
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  8. Set default walltime to 1h

    j-woz committed Feb 25, 2023
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  9. Check for directory

    j-woz committed Feb 25, 2023
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Commits on Feb 27, 2023

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  2. Be more verbose

    j-woz committed Feb 27, 2023
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  4. Clean up

    j-woz committed Feb 27, 2023
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  5. Support big plan N=16

    j-woz committed Feb 27, 2023
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Commits on Mar 1, 2023

  1. sbcast test works

    j-woz committed Mar 1, 2023
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  2. Adding hook-1.tcl mpi-io.sh

    j-woz committed Mar 1, 2023
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  3. Adding README.adoc

    j-woz committed Mar 1, 2023
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  4. Respect user TURBINE_PRELAUNCH

    j-woz committed Mar 1, 2023
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  5. Say "guide"

    j-woz committed Mar 1, 2023
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Commits on Mar 4, 2023

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Commits on Mar 8, 2023

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  3. Initial structure

    j-woz committed Mar 8, 2023
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Commits on Mar 15, 2023

  1. o Use CANDLE_OUTPUT_DIR as this is a required variable for sending o/…

    …p from candle_lib to use other o/p options than CANDLE_DATA_DIR
    rajeeja committed Mar 15, 2023
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Commits on Mar 16, 2023

  1. WIP cmp-cv workflow

    j-woz committed Mar 16, 2023
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Commits on Mar 22, 2023

  1. workflow to find domain errors

    Gihan Panapitiya committed Mar 22, 2023
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  2. readme updated

    Gihan Panapitiya committed Mar 22, 2023
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  3. readme updated

    Gihan Panapitiya committed Mar 22, 2023
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  4. readme updated

    Gihan Panapitiya committed Mar 22, 2023
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  5. readme updated

    Gihan Panapitiya committed Mar 22, 2023
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  6. instructions to run the examplle

    Gihan Panapitiya committed Mar 22, 2023
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  7. Update README.adoc

    gihanpanapitiya authored Mar 22, 2023
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  8. Update README.adoc

    gihanpanapitiya authored Mar 22, 2023
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  9. Update README.adoc

    gihanpanapitiya authored Mar 22, 2023
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  10. Update model.sh

    gihanpanapitiya authored Mar 22, 2023
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Commits on Mar 23, 2023

  1. model.sh, obj_app.swift

    Gihan Panapitiya committed Mar 23, 2023
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  2. obj_container

    Gihan Panapitiya committed Mar 23, 2023
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Commits on Mar 24, 2023

  1. about compare.py

    Gihan Panapitiya committed Mar 24, 2023
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Commits on Mar 25, 2023

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Commits on Apr 3, 2023

  1. o Changes for Mac OSX M1 and also fixes for GA test-1 that would fix …

    …Jenkins failure for OneD test problem
    rajeeja committed Apr 3, 2023
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  2. o Remove hard coded name

    rajeeja committed Apr 3, 2023
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Commits on Apr 4, 2023

  1. o Get cmp-cv to run

    Rajeev Jain committed Apr 4, 2023
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  2. Merge branch 'develop' of https://github.com/ECP-CANDLE/Supervisor in…

    …to develop
    Rajeev Jain committed Apr 4, 2023
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  3. Do not quote strings

    j-woz committed Apr 4, 2023
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  4. WS

    j-woz committed Apr 4, 2023
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  5. Add numbers

    j-woz committed Apr 4, 2023
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Commits on Apr 5, 2023

  1. o Write empty results.txt if nothing found, add more Params to singul…

    …arity call, fix compare.py and wait for drug_features.csv file. cmp-cv runs on lambda. TODO: fix compare
    Rajeev Jain committed Apr 5, 2023
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  2. o Move compare.py to cmp-cv workflow level

    Rajeev Jain committed Apr 5, 2023
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Commits on Apr 6, 2023

  1. o enable drug_features.csv, a manual process to put the file in CDD f…

    …or now
    Rajeev Jain committed Apr 6, 2023
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Commits on Apr 12, 2023

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  2. o Add new workflow cross-study-generalization CSG, also add new param…

    … model_script - train.sh preprocess.sh or infer.sh. Fix cmp-cv workflow
    Rajeev Jain committed Apr 12, 2023
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  3. o Fix args

    Rajeev Jain committed Apr 12, 2023
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  4. o Add comments

    Rajeev Jain committed Apr 12, 2023
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Commits on Apr 18, 2023

  1. Initial dense-noise workflow

    j-woz committed Apr 18, 2023
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Commits on Apr 25, 2023

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Commits on Apr 26, 2023

  1. Update Swift/T/Frontier

    j-woz committed Apr 26, 2023
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  2. Better messaging on Frontier

    j-woz committed Apr 26, 2023
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  3. Fix error message

    j-woz committed Apr 26, 2023
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  4. More checks

    j-woz committed Apr 26, 2023
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  5. Shorten job name on Frontier

    j-woz committed Apr 26, 2023
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  6. WS

    j-woz committed Apr 26, 2023
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  7. Update function name

    j-woz committed Apr 26, 2023
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Commits on May 3, 2023

  1. Support for model.log

    j-woz committed May 3, 2023
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Commits on May 8, 2023

  1. Fixes for Frontier

    j-woz committed May 8, 2023
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  3. Merge

    j-woz committed May 8, 2023
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Commits on May 11, 2023

  1. Use new Swift/T

    j-woz committed May 11, 2023
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  2. Use plan file from NVMe

    j-woz committed May 11, 2023
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Commits on May 12, 2023

  1. o Fix things as per new defs

    Rajeev Jain committed May 12, 2023
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  2. o Fix cmp-cv as per candle_model..

    Rajeev Jain committed May 12, 2023
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Commits on May 17, 2023

  1. Handle more errors

    j-woz committed May 17, 2023
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  2. Try new Swift/T

    j-woz committed May 17, 2023
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  4. Backup DB and its log

    j-woz committed May 17, 2023
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  5. Better output and logging

    j-woz committed May 17, 2023
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  6. Better output and logging

    j-woz committed May 17, 2023
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  7. Minor changes

    j-woz committed May 17, 2023
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  8. Update for new log format

    j-woz committed May 17, 2023
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Commits on May 22, 2023

  1. Better logging

    j-woz committed May 22, 2023
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Commits on May 23, 2023

  1. Set default timeout

    j-woz committed May 23, 2023
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Commits on May 24, 2023

  1. New Swift/T

    j-woz committed May 24, 2023
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  2. Update header

    j-woz committed May 24, 2023
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  3. Update to new names

    j-woz committed May 24, 2023
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    j-woz committed May 24, 2023
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  6. Set CANDLE_MODEL_IMPL

    j-woz committed May 24, 2023
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  7. Reduce get_expid arguments

    j-woz committed May 24, 2023
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  8. Improve error message

    j-woz committed May 24, 2023
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  9. Fix usage message

    j-woz committed May 24, 2023
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  10. Set PARAM_SET_FILE for now

    j-woz committed May 24, 2023
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  11. Rename to MODEL_RETURN

    j-woz committed May 24, 2023
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  13. Rename to MODEL_RETURN

    j-woz committed May 24, 2023
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  14. Set MODEL_RETURN

    j-woz committed May 24, 2023
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Commits on May 25, 2023

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Commits on May 26, 2023

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  2. Settings for Lambda7

    Justin Wozniak committed May 26, 2023
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  4. Fix syntax

    Justin Wozniak committed May 26, 2023
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  5. New test from Wilke

    j-woz committed May 26, 2023
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Commits on May 30, 2023

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  2. get_expid() takes 1 argument

    j-woz committed May 30, 2023
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  3. Clean up

    j-woz committed May 30, 2023
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  5. Settings for Lambda7

    j-woz committed May 30, 2023
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  7. Better messaging and comments

    j-woz committed May 30, 2023
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  8. Update names

    j-woz committed May 30, 2023
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  9. New generic test for GA

    j-woz committed May 30, 2023
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  10. Clean up

    j-woz committed May 30, 2023
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  11. Remove PARAM_SET_FILE

    j-woz committed May 30, 2023
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  12. Add nice output log

    j-woz committed May 30, 2023
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  15. Clean up

    j-woz committed May 30, 2023
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  16. Update names

    j-woz committed May 30, 2023
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  17. Fix typo

    j-woz committed May 30, 2023
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  18. New GA test for SIFs

    j-woz committed May 30, 2023
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Commits on May 31, 2023

  1. New param space for HiDRA

    j-woz committed May 31, 2023
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  2. Probably better error handling

    j-woz committed May 31, 2023
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  3. Better final output

    j-woz committed May 31, 2023
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Commits on Jun 1, 2023

  1. Update header

    j-woz committed Jun 1, 2023
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  2. Add an iteration report

    j-woz committed Jun 1, 2023
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    j-woz committed Jun 1, 2023
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  4. Merge

    j-woz committed Jun 1, 2023
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Commits on Jun 2, 2023

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Commits on Jun 3, 2023

  1. o Add IGTD for lambda

    Rajeev Jain committed Jun 3, 2023
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Commits on Jun 5, 2023

  1. Drop- misspelled

    j-woz committed Jun 5, 2023
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  2. Use modern Swift

    j-woz committed Jun 5, 2023
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Commits on Jun 6, 2023

  1. Enable error handling in DEAP

    j-woz committed Jun 6, 2023
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    j-woz committed Jun 6, 2023
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  3. New Swift/T for Polaris

    j-woz committed Jun 6, 2023
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  4. Clean up

    j-woz committed Jun 6, 2023
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  5. Ignore errors in tCNNS

    j-woz committed Jun 6, 2023
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  6. Support random fake crashes

    j-woz committed Jun 6, 2023
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Commits on Jun 9, 2023

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  2. Update compare.py

    gihanpanapitiya authored Jun 9, 2023
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