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{2023.06,a64fx}[foss/2023a] R-bundle-CRAN v2023.12 #77

{2023.06,a64fx}[foss/2023a] R-bundle-CRAN v2023.12

{2023.06,a64fx}[foss/2023a] R-bundle-CRAN v2023.12 #77

# documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions
name: Tests for eessi_module_functionality in software.eessi.io
on:
push:
branches: [ "*-software.eessi.io" ]
pull_request:
permissions:
contents: read # to fetch code (actions/checkout)
jobs:
build:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
EESSI_VERSION:
- 2023.06
steps:
- name: Check out software-layer repository
uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1
- name: Mount EESSI CernVM-FS pilot repository
uses: cvmfs-contrib/github-action-cvmfs@55899ca74cf78ab874bdf47f5a804e47c198743c # v4.0
with:
cvmfs_config_package: https://github.com/EESSI/filesystem-layer/releases/download/latest/cvmfs-config-eessi_latest_all.deb
cvmfs_http_proxy: DIRECT
cvmfs_repositories: software.eessi.io
- name: Test for making sure spider cache is being used and not being rebuilt
run: |
. /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash # Initialise Lmod
export MODULEPATH=init/modules
configfile="configfile.txt"
module -T load EESSI/${{matrix.EESSI_VERSION}}
module --config > "${configfile}" 2>&1
grep cache "${configfile}" | grep software | grep -v compat
if timeout 10s bash -c "LMOD_PAGER=none module --terse avail" && grep cache "${configfile}" | grep software | grep -v compat; then
echo "EESSI spider cache is being used"
else
echo "EESSI spider cache is being rebuilt" >&2
exit 1
fi
env | grep LMOD
module purge
unset MODULEPATH
- name: Test for archdetect_cpu functionality with invalid path
run: |
. /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash # Initialise Lmod
export MODULEPATH=init/modules
set +e # Do not exit immediately if a command exits with a non-zero status
export EESSI_ARCHDETECT_OPTIONS="dummy/cpu"
outfile="outfile.txt"
module load EESSI/${{matrix.EESSI_VERSION}} > "${outfile}" 2>&1
cat "${outfile}"
if grep -q "Software directory check" "${outfile}"; then
echo "Test for picking up invalid path on \${archdetect_cpu} PASSED"
else
echo "Test for picking up invalid path on \${archdetect_cpu} FAILED" >&2
exit 1
fi
unset EESSI_ARCHDETECT_OPTIONS
set -e # Re-enable exit on non-zero status
- name: Test for expected variables while adding dummy cpu archs and loading EESSI module
run: |
. /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash # Initialise Lmod
export MODULEPATH=init/modules
CPU_ARCH=$(./init/eessi_archdetect.sh -a cpupath)
export EESSI_ARCHDETECT_OPTIONS="dummy/cpu:${CPU_ARCH}:dummy1/cpu1"
moduleoutfile="moduleout.txt"
sourceoutfile="sourceout.txt"
module load EESSI/${{matrix.EESSI_VERSION}}
env | grep -E '^(EESSI_S|EESSI_C)' | sort > "${moduleoutfile}"
module unload EESSI/${{matrix.EESSI_VERSION}}
source /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/init/bash
env | grep -E '^(EESSI_S|EESSI_C)' | sort > "${sourceoutfile}"
cat "${moduleoutfile}"
cat "${sourceoutfile}"
if (diff "${moduleoutfile}" "${sourceoutfile}" > /dev/null); then
echo "Test for checking env variables PASSED"
else
echo "Test for checking env variables FAILED" >&2
exit 1
fi