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Check for identical sequences and names #12

Check for identical sequences and names

Check for identical sequences and names #12

Workflow file for this run

name: build
on: [push, workflow_dispatch]
jobs:
build:
runs-on: ubuntu-22.04
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.9
uses: actions/setup-python@v2
with:
python-version: '3.9'
- name: Install dependencies
# Install dependencies for WeasyPrint (pdf_reports): https://doc.courtbouillon.org/weasyprint/stable/first_steps.html#ubuntu-20-04
run: |
python -m pip install --upgrade pip
sudo apt-get -y install python3-cffi python3-brotli libpango-1.0-0 libharfbuzz0b libpangoft2-1.0-0
pip install pytest pytest-cov coveralls
pip install pypdf libsass
- name: Test pip installation
run: |
pip install -e .
- name: Test with pytest
run: |
python -m pytest --cov=seqreport
# - name: Coveralls
# run: coveralls
# env:
# GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
# COVERALLS_SERVICE_NAME: github