Add initial CLI integration tests

tests/__init__.py

@@ -6,6 +6,7 @@
 from tests.mongo_mock import MongoMock
 from tests.opensearch_mock import OpenSearchMock
 from tests.opensearch import OpenSearch
+from tests.cli import CLI
 
 if __name__ == "__main__":
     logging.basicConfig(level=logging.INFO)

tests/cli.py

@@ -0,0 +1,41 @@
+import os
+import unittest
+import logging
+from time import sleep
+
+
+class CLI(unittest.TestCase):
+    """
+    Testing OpenSearch database CLI integration.
+    """
+
+    @classmethod
+    def setUpClass(cls):
+        """
+        Set up OpenSearch database connection and login with CLI.
+        """
+        if os.getenv("GITHUB_ACTIONS") != "true":
+            raise unittest.SkipTest("Only runs via GitHub Actions")
+        cls.security_enabled = os.getenv("security_enabled") == "true"
+        cls.port = int(os.environ["port"])
+        cls.host = "localhost"
+
+        logging.basicConfig(level=logging.INFO)
+
+        url = f"opensearch://admin:admin@{cls.host}:{cls.port}"
+        if not cls.security_enabled:
+            url += " --disable_ssl"
+        try:
+            os.system(f"abcd login {url}")
+        except (ConnectionError, ConnectionResetError):
+            sleep(10)
+            os.system(f"abcd login {url}")
+
+    def test_summary(self):
+        """
+        Test summary output of stored data.
+        """
+        class_path = os.path.normpath(os.path.abspath(__file__))
+        data_file = os.path.dirname(class_path) + "/data/example.xyz"
+        os.system(f"abcd upload {data_file}")
+        os.system("abcd summary")

tests/data/example.xyz

@@ -0,0 +1,4 @@
+2
+Properties=species:S:1:pos:R:3 s="sadf" _vtk_test="t _ e s t" pbc="F F F"
+Si       0.00000000       1.00000000       2.00000000
+Si       4.00000000       5.00000000       6.00000000