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added chunks_per_page parameter to H5Image (#224) #232

added chunks_per_page parameter to H5Image (#224)

added chunks_per_page parameter to H5Image (#224) #232

Workflow file for this run

name: h5pyd CI
on:
push:
pull_request:
branches: [master]
env:
ADMIN_PASSWORD: admin
ADMIN_USERNAME: admin
USER_NAME: test_user1
USER_PASSWORD: test
USER2_NAME: test_user2
USER2_PASSWORD: test
HSDS_USERNAME: test_user1
HSDS_PASSWORD: test
HSDS_ENDPOINT: http://127.0.0.1:5101
ROOT_DIR: ${{github.workspace}}/hsds/hsds_root
BUCKET_NAME: hsds_bucket
HS_ENDPOINT: http://127.0.0.1:5101
H5PYD_TEST_FOLDER: /home/test_user1/h5pyd_tests/
jobs:
build-and-test:
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, windows-latest]
python-version: ["3.9", "3.10", "3.11", "3.12"]
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
shell: bash
run: |
python -m pip install --upgrade pip
python -m pip install flake8 pytest
- name: Lint with flake8
shell: bash
run: |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics # stop the build if there are Python syntax errors or undefined names
flake8 . --count --max-complexity=10 --max-line-length=127 --statistics # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
- name: Checkout HSDS
uses: actions/checkout@v4
with:
repository: HDFGroup/hsds
path: ${{github.workspace}}/hsds
- name: Install HSDS
working-directory: ${{github.workspace}}/hsds
shell: bash
run: |
pip install -e .
- name: Start HSDS
shell: bash
working-directory: ${{github.workspace}}/hsds
run: |
mkdir hsds_root
mkdir hsds_root/hsds_bucket
cp admin/config/groups.default admin/config/groups.txt
cp admin/config/passwd.default admin/config/passwd.txt
hsds --root_dir hsds_root --host localhost --port 5101 --password_file admin/config/passwd.txt --logfile hs.log --loglevel DEBUG --config_dir=admin/config --count=4 &
- name: Wait for node startup
shell: bash
run: |
sleep 30
- name: HSDS Setup
shell: bash
env:
ADMIN_PASSWORD: admin
ADMIN_USERNAME: admin
working-directory: ${{github.workspace}}/hsds
run: |
python tests/integ/setup_test.py
- name: Install h5pyd package
shell: bash
run: |
pip install -e .
- name: Create h5pyd test folder
env:
HS_USERNAME: test_user1
HS_PASSWORD: test
TEST2_USERNAME: test_user2
TEST2_PASSWORD: test
run: |
hstouch -v /home/test_user1/h5pyd_tests/
- name: Run h5pyd tests
id: h5pyd-tests
env:
HS_USERNAME: test_user1
HS_PASSWORD: test
TEST2_USERNAME: test_user2
TEST2_PASSWORD: test
run: |
python testall.py
- name: Show HSDS Logs on Fail
working-directory: ${{github.workspace}}/hsds
# Only run if the whole workflow failed due to h5pyd tests
if: ${{failure() && steps.h5pyd-tests.outcome == 'failure'}}
run: |
cat hs.log
- name: Run h5pyd tests with h5py
env:
HS_USERNAME: test_user1
HS_PASSWORD: test
TEST2_USERNAME: test_user2
TEST2_PASSWORD: test
USE_H5PY: 1
run: |
python testall.py