use HDF5 1.14.2 and NetCDF 4.9.2 #518
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Mac with MPICH | |
| on: | |
| push: | |
| branches: [ master, dev ] | |
| paths-ignore: | |
| - '**/*.md' | |
| - '**/*.txt' | |
| - '**/*.jpg' | |
| - '**/*.png' | |
| - 'docs/*' | |
| - 'case_studies/*' | |
| pull_request: | |
| branches: [ master, dev ] | |
| paths-ignore: | |
| - '**/*.md' | |
| - '**/*.txt' | |
| - '**/*.jpg' | |
| - '**/*.png' | |
| - 'docs/*' | |
| - 'case_studies/*' | |
| env: | |
| MPICH_VERSION: 4.1.2 | |
| HDF5_VERSION: 1.14.2 | |
| NETCDF_VERSION: 4.9.2 | |
| jobs: | |
| build: | |
| runs-on: macos-latest | |
| timeout-minutes: 60 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up dependencies | |
| run: | | |
| brew instal automake autoconf libtool m4 open-mpi zlib | |
| - name: Install HDF5 | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| rm -rf HDF5 ; mkdir HDF5 ; cd HDF5 | |
| VER_MAJOR=${HDF5_VERSION%.*} | |
| wget -cq https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${VER_MAJOR}/hdf5-${HDF5_VERSION}/src/hdf5-${HDF5_VERSION}.tar.gz | |
| tar -zxf hdf5-${HDF5_VERSION}.tar.gz | |
| cd hdf5-${HDF5_VERSION} | |
| ./configure --prefix=${GITHUB_WORKSPACE}/HDF5 \ | |
| --silent \ | |
| --enable-parallel \ | |
| --enable-build-mode=production \ | |
| --enable-unsupported \ | |
| --enable-threadsafe \ | |
| --disable-doxygen-doc \ | |
| --disable-doxygen-man \ | |
| --disable-doxygen-html \ | |
| --disable-tests \ | |
| --disable-fortran \ | |
| --disable-cxx \ | |
| CC=mpicc | |
| make -s LIBTOOLFLAGS=--silent V=1 -j 8 install > qout 2>&1 | |
| make -s -j 8 distclean >> qout 2>&1 | |
| - name: Install NetCDF | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| rm -rf /NetCDF ; mkdir NetCDF ; cd NetCDF | |
| wget -qc https://github.com/Unidata/netcdf-c/archive/refs/tags/v${NETCDF_VERSION}.tar.gz | |
| tar -zxf v${NETCDF_VERSION}.tar.gz | |
| cd netcdf-c-${NETCDF_VERSION} | |
| ./configure --prefix=${GITHUB_WORKSPACE}/NetCDF \ | |
| --silent \ | |
| --disable-dap \ | |
| --disable-nczarr \ | |
| --disable-nczarr-filters \ | |
| --disable-filter-testing \ | |
| --disable-byterange \ | |
| CC=mpicc \ | |
| CPPFLAGS="-I${GITHUB_WORKSPACE}/HDF5/include" \ | |
| LDFLAGS="-L${GITHUB_WORKSPACE}/HDF5/lib" \ | |
| LIBS="-lhdf5" | |
| make -s LIBTOOLFLAGS=--silent V=1 -j 8 install > qout 2>&1 | |
| make -s -j 8 distclean >> qout 2>&1 | |
| - name: Configure Log VOL connector | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| autoreconf -i | |
| ./configure --with-hdf5=${GITHUB_WORKSPACE}/HDF5 \ | |
| --enable-test-netcdf4=${GITHUB_WORKSPACE}/NetCDF \ | |
| CFLAGS="-O0 -g" CXXFLAGS="-O0 -g -std=c++14" LIBS=-lstdc++ | |
| # Do NOT test QMCPACK, as it requires FFTW which fails to build | |
| - name: Print config.log if error | |
| if: ${{ failure() }} | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| cat config.log | |
| - name: Build Log VOL connector | |
| if: ${{ success() }} | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| make -j 8 | |
| # Do NOT parallel build, cmake for external tests can fail | |
| make tests | |
| # Skip all test runs for unknown reason of programs hanging | |
| # Do NOT test QMCPACK, as it requires FFTW which fails to build | |
| # Do NOT test hdf5-iotest, as uuid_generate_time_safe not available on mac osx | |
| # make check | |
| # make ptest | |
| # make -s V=1 LIBTOOLFLAGS=--silent distcheck DISTCHECK_CONFIGURE_FLAGS="--silent --with-hdf5=${GITHUB_WORKSPACE}/HDF5 --enable-shared CXXFLAGS='-O0 -g -std=c++14' LIBS=-lstdc++" | |
| - name: make distclean | |
| if: ${{ always() }} | |
| run: | | |
| cd ${GITHUB_WORKSPACE} | |
| make -s distclean | |