add sva and dependencies to lock

ICB-DCM · Jul 4, 2024 · 2750cc7 · 2750cc7
1 parent 95da9d9
commit 2750cc7
Showing 1 changed file with 51 additions and 0 deletions.
diff --git a/program/renv.lock b/program/renv.lock
@@ -1475,6 +1475,22 @@
       ],
       "Hash": "fedd9d00c2944ff00a0e2696ccf048ec"
     },
+    "edgeR": {
+      "Package": "edgeR",
+      "Version": "3.40.2",
+      "Source": "Bioconductor",
+      "Requirements": [
+        "R",
+        "Rcpp",
+        "graphics",
+        "limma",
+        "locfit",
+        "methods",
+        "stats",
+        "utils"
+      ],
+      "Hash": "e5ea1fc0a6bb6213941c8be214bf493d"
+    },
     "ellipsis": {
       "Package": "ellipsis",
       "Version": "0.3.2",
@@ -1650,6 +1666,23 @@
       ],
       "Hash": "0d9bf02413ddc2bbe8da9ce369dcdd2b"
     },
+    "genefilter": {
+      "Package": "genefilter",
+      "Version": "1.80.3",
+      "Source": "Bioconductor",
+      "Requirements": [
+        "AnnotationDbi",
+        "Biobase",
+        "BiocGenerics",
+        "annotate",
+        "grDevices",
+        "graphics",
+        "methods",
+        "stats",
+        "survival"
+      ],
+      "Hash": "456e757607027526632bc38e4d92ff50"
+    },
     "geneplotter": {
       "Package": "geneplotter",
       "Version": "1.76.0",
@@ -3646,6 +3679,24 @@
       ],
       "Hash": "b8e943d262c3da0b0febd3e04517c197"
     },
+    "sva": {
+      "Package": "sva",
+      "Version": "3.46.0",
+      "Source": "Bioconductor",
+      "Requirements": [
+        "BiocParallel",
+        "R",
+        "edgeR",
+        "genefilter",
+        "graphics",
+        "limma",
+        "matrixStats",
+        "mgcv",
+        "stats",
+        "utils"
+      ],
+      "Hash": "cff27a16344227cf1b74703774380618"
+    },
     "svglite": {
       "Package": "svglite",
       "Version": "2.1.3",