Healthcare Data Generator

Note

A dockerized healthcare data generator based on Synthea

Getting Started

Local Setup

1. Git clone this repository into your preferred directory.
2. Run make setup to download the necessary dependencies.
3. Modify the properties for synthetic data generation in app/synthea.properties if needed.
4. Run make build to build the docker image.
5. Run make generate p=20 to generate 20 synthetic patients data, with specified number of patient to be generated.
6. Otherwise, run make generate to generate a default of 10 synthetic patients data.
7. Generated patients data will be stored in the /data folder.

From Docker Hub

1. Pull image with docker pull jackleejm/healthcare-data-gen:0.1.0.
2. Create a temporary folder called data/.
3. Run make generate or make generate p=20 to generate synthetic patient data.

Generated Data

• The default generated data should assume the following folder structure with the standard unchanged synthea.properties config file.
• More details on the specifics of the CSVs, please visit the official Synthea's wiki.

data/
├── csv/
│   ├── allergies.csv
│   ├── careplans.csv
│   ├── claims.csv
│   ├── claims_transactions.csv
│   ├── conditions.csv
│   ├── devices.csv
│   ├── encounters.csv
│   ├── imaging_studies.csv
│   ├── immunizations.csv
│   ├── medications.csv
│   ├── observations.csv
│   ├── organizations.csv
│   ├── patients.csv
│   ├── payer_transitions.csv
│   ├── payers.csv
│   ├── procedures.csv
│   ├── providers.csv
│   └── supplies.csv
├── fhir/
│   ├── hospitalInformation1717732754594.json
│   └── practitionerInformation1717732754594.json
├── metadata/
│   └── 2024_06_07T03_59_14Z_100_Massachusetts_59f5e3a2_c0f2_4600_a4df_21d854747e53.json
└── symptoms/
    └── csv/
        └── symptoms.csv