CWL workflow for automating single-cell RNAseq analysis, including post-counting data manipulation
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CWL workflow for single-cell RNAseq data analysis using CellRanger or STARsolo. Performs initial steps from read trimming to generating the count matrix, as well as QC, normalization, feature selection, dimensionality reduction, clustering and marker gene detection.
JasonCharamis/CWL-workflow-for-single-cell-RNAseq-analysis
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CWL workflow for single-cell RNAseq data analysis using CellRanger or STARsolo. Performs initial steps from read trimming to generating the count matrix, as well as QC, normalization, feature selection, dimensionality reduction, clustering and marker gene detection.
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