This the repository for my Phd Dissertation. General Introduction and Discussion are in the "General" folder. Source for chapters 1, 2, and 3 are in "VWM", "Prisms", and "SA", respectively.
Each of the chapters also contains the analysis code (Rmd files, as well as the output html files, which could not be computed without the orgional data files). Figures are in PDF format, and the diagramatic ones are also in the origional Inkscape SVG.
Run "make" to combine all the sources into the complete dissertation. Run "make help" for a list of options"
Unless otherwise noted, this work is licensed under a Creative Commons Attribution 4.0 International License. The two exceptions are the "uw-ethesis" LaTeX template files, of which I am not the origional author -as is noted in the file header.
The manuscript is written in Markdown. See the 'makefile' for how I used GNU Make to build the document. I used Pandoc to produce both docx (for collaboration) and latex files from the markdown. I managed my references in Zotero, and used an additional plugin Better_Bibtex to export a more managed biblatex datafile (dissertation.bib) with 'AuthorYear' citation keys. Data analysis was done in R using RStudio, and the figures were produced in R with ggplot2. The diagramatic figures were produced in Inkscape. The final product was produced with LaTeX. All of the aformentioned packages are Free_Software.