AI4Med-info

This is a repository of AI projects about medical, we will collect relatived projects for enjoy...update continue. This hub main includes classfication, representation and segmentation on Pathology.

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• Classification
• Representation
• Segmentation
• Generation
• Quantification

Classification

MICCAI2023	HIGT: Hierarchical Interaction Graph-Transformer for Whole Slide Image Analysis	code
MICCAI2024	HistGen: Histopathology Report Generation via Local-Global Feature Encoding and Cross-modal Context Interaction	code
Nature	A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliomas	code
WACV2021	Learn Like a Pathologist: Curriculum Learning by Annotator Agreement for Histopathology Image Classification	None
CVPR2023	Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning	code
CVPR2023	Task-Specific Fine-Tuning via Variational Information Bottleneck for Weakly-Supervised Pathology Whole Slide Image Classification	code
CVPR2024	Prompting Vision Foundation Models for Pathology Image Analysis	code	√√√
CVPR2020	Predicting Lymph Node Metastasis Using Histopathological Images Based on Multiple Instance Learning With Deep Graph Convolution	None	√√√
CVPR2020	Multi-scale Domain-adversarial Multiple-instance CNN for Cancer Subtype Classification with Unannotated Histopathological Images	code
WACV2021	Kernel Self-Attention for Weakly-Supervised Image Classification Using Deep Multiple Instance Learning	code
CVPR2021	Dual-Stream Multiple Instance Learning Network for Whole Slide Image Classification With Self-Supervised Contrastive Learning	code
CVPR2022	DTFD-MIL: Double-Tier Feature Distillation Multiple Instance Learning for Histopathology Whole Slide Image Classification	code
CVPR2023	Multiple Instance Learning via Iterative Self-Paced Supervised Contrastive Learning	coda
ICCV2023	LNPL-MIL: Learning from Noisy Pseudo Labels for Promoting Multiple Instance Learning in Whole Slide Image	None
ICCV2023	Multiple Instance Learning Framework with Masked Hard Instance Mining for Whole Slide Image Classification	code
WACV2024	SC-MIL: Supervised Contrastive Multiple Instance Learning for Imbalanced Classification in Pathology	None
TMI2024	Bayesian Collaborative Learning for Whole-Slide Image Classification	None
TMI2024	MuRCL: Multi-Instance Reinforcement Contrastive Learning for Whole Slide Image Classification	code
TMI2024	Pseudo-Bag Mixup Augmentation for Multiple Instance Learning-Based Whole Slide Image Classification	code
TMI2024	DeepTree: Pathological Image Classification Through Imitating Tree-Like Strategies of Pathologists	code
TMI2024	Pseudo-Data Based Self-Supervised Federated Learning for Classification of Histopathological Images	None
ACMMM2024	Mixed Prototype Correction for Causal Inference in Medical Image Classification	None
ACMMM2024	GuidedNet: Semi-Supervised Multi-Organ Segmentation via Labeled Data Guide Unlabeled Data	None
arxiv2024	M4: Multi-Proxy Multi-Gate Mixture of Experts Network for Multiple Instance Learning in Histopathology Image Analysis	code	MIL
ACMMM2024	SAM-MIL: A Spatial Contextual Aware Multiple Instance Learning Approach for Whole Slide Image Classification	code	MIL
CVPR2024	ViLa-MIL: Dual-scale Vision-Language Multiple Instance Learning for Whole Slide Image Classification	code	MIL
CVPR2024	Dynamic Policy-Driven Adaptive Multi-Instance Learning for Whole Slide Image Classification	code	MIL
CVPR2024	Generalizable Whole Slide Image Classification with Fine-Grained Visual-Semantic Interaction	code
CVPR2024	SI-MIL: Taming Deep MIL for Self-Interpretability in Gigapixel Histopathology	code
Nature Medicine	A visual–language foundation model for pathology image analysis using medical Twitter	code

Representation

CVPR2021	Multiple Instance Captioning: Learning Representations From Histopathology Textbooks and Articles	code
CVPR2023	Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning	code
CVPR2023	Benchmarking Self-Supervised Learning on Diverse Pathology Datasets	code
ICCV2023	CO-PILOT: Dynamic Top-Down Point Cloud with Conditional Neighborhood Aggregation for Multi-Gigapixel Histopathology Image Representation	None
WACV2024	Convolutional Masked Image Modeling for Dense Prediction Tasks on Pathology Images	None
CVPR2024	Transcriptomics-guided Slide Representation Learning in Computational Pathology	code
CVPR2024	Dynamic Graph Representation with Knowledge-aware Attention for Histopathology Whole Slide Image Analysis	code
CVPR2024	CPLIP: Zero-Shot Learning for Histopathology with Comprehensive Vision-Language Alignment	code
CVPR2024	Rotation-Agnostic Image Representation Learning for Digital Pathology	code
CVPR2023	Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images	code
CVPR2024	Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology	code	unsup.
CVPR2024	Feature Re-Embedding: Towards Foundation Model-Level Performance in Computational Pathology	code

Segmentation

arxiv24.08	InstanSeg: an embedding-based instance segmentation algorithm optimized for accurate, efficient and portable cell segmentation	code
arxiv24.07	ESP-MedSAM: Efficient Self-Prompting SAM for Universal Domain-Generalized Medical Image Segmentation	code
ICCV2019	CAMEL: A Weakly Supervised Learning Framework for Histopathology Image Segmentation	code
ICCV2021	Mutual-Complementing Framework for Nuclei Detection and Segmentation in Pathology Image	code
CVPR2023	Weakly Supervised Segmentation With Point Annotations for Histopathology Images via Contrast-Based Variational Model	code
CVPR2024	PrPSeg: Universal Proposition Learning for Panoramic Renal Pathology Segmentation	None
TMI2024	HAMIL: High-Resolution Activation Maps and Interleaved Learning for Weakly Supervised Segmentation of Histopathological Images	code
TMI2024	Cyclic Learning: Bridging Image-Level Labels and Nuclei Instance Segmentation	None
TMI2024	Which Pixel to Annotate: A Label-Efficient Nuclei Segmentation Framework	None
TMI2024	Learning Robust Shape Regularization for Generalizable Medical Image Segmentation	code
TMI2024	ScribFormer: Transformer Makes CNN Work Better for Scribble-Based Medical Image Segmentation	None
TMI2024	BoNuS: Boundary Mining for Nuclei Segmentation With Partial Point Labels	code
TMI2024	SC-SSL: Self-Correcting Collaborative and Contrastive Co-Training Model for Semi-Supervised Medical Image Segmentation	code
TMI2024	RECIST-Induced Reliable Learning: Geometry-Driven Label Propagation for Universal Lesion Segmentation	None
TMI2024	Unsupervised Domain Adaptation for Medical Image Segmentation by Disentanglement Learning and Self-Training	None
MedIA2024	CellViT: Vision Transformers for precise cell segmentation and classification	code
MedIA2024	Mutual learning with reliable pseudo label for semi-supervised medical image segmentation	code
MICCAL2024	ASPS: Augmented Segment Anything Model for Polyp Segmentation	code
CVPR2020	Structure Boundary Preserving Segmentation for Medical Image with Ambiguous Boundary	None
ACMMM2024	BSBP-RWKV: Background Suppression with Boundary Preservation for Efficient Medical Image Segmentation	None
arxiv2024	LKCell: Efficient Cell Nuclei Instance Segmentation with Large Convolution Kernels	code	cell ins. seg.
MICCAI2019	Weakly Supervised Cell Instance Segmentation by Propagating from Detection Response	code	weak sup., cell ins. seg.
MedIA2019	HoVer-Net: Simultaneous Segmentation and Classification of Nuclei in Multi-Tissue Histology Images	code	full sup., cell ins. seg.
arxiv	A Foundation Model for Cell Segmentation	code	full sup., cell ins. seg.
MICCAI2019	Improving Nuclei/Gland Instance Segmentation in Histopathology Images by Full Resolution Neural Network and Spatial Constrained Loss	code
CVPR2024	Incremental Nuclei Segmentation from Histopathological Images via Future-class Awareness and Compatibility-inspired Distillation	code
CVPR2024	Mudslide: A Universal Nuclear Instance Segmentation Method	None
CVPR2024	One-Prompt to Segment All Medical Images	code
IEEE Journal of Biomedical and Health Informatics	SONNET: A Self-Guided Ordinal Regression Neural Network for Segmentation and Classification of Nuclei in Large-Scale Multi-Tissue Histology Images	code
MedIA2023	Nuclei segmentation with point annotations from pathology image sviaself-supervised learning and co-training	code
IEEE International Symposium on Biomedical Imaging (ISBI)2022	Weakly Supervised Nuclei Segmentation via Instance Learning	code
MedIA2021	Weakly supervised cell instance segmentation under various conditions	None
Electronics2024	EnNuSegNet: Enhancing Weakly Supervised Nucleus Segmentation through Feature Preservation and Edge Refinement	None
MICCAI Workshop2023	Weakly Supervised Medical Image Segmentation Through Dense Combinations of Dense Pseudo-Labels	code
CVPR2023	Pseudo-label Guided Contrastive Learning for Semi-supervised Medical Image Segmentation	code
ICCV2023	CDNet: Centripetal Direction Network for Nuclear Instance Segmentation	code
CVPR2021	FedDG: Federated Domain Generalization on Medical Image Segmentation via Episodic Learning in Continuous Frequency Space	code
AAAI2020	Shape-Aware Organ Segmentation by Predicting Signed Distance Maps	None	Organ Seg.
MICCAI2020	Shape-aware Meta-learning for Generalizing Prostate MRI Segmentation to Unseen Domains	code
NeurIPS2023	Keypoint-Augmented Self-Supervised Learning for Medical Image Segmentation with Limited Annotation	code
ECCV2022	Learning Topological Interactions for Multi-Class Medical Image Segmentation	code
IJCAI2022	Uncertainty-Guided Pixel Contrastive Learning for Semi-Supervised Medical Image Segmentation	code

Generation

WACV2022	A Morphology Focused Diffusion Probabilistic Model for Synthesis of Histopathology Images	None
CVPR2023	Topology-Guided Multi-Class Cell Context Generation for Digital Pathology	None
WACV2024	PathLDM: Text Conditioned Latent Diffusion Model for Histopathology	code

Quantification

CVPR2021	Quantifying Explainers of Graph Neural Networks in Computational Pathology	code
CVPR2022	DeepLIIF: An Online Platform for Quantification of Clinical Pathology Slides	code