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Update vignette after lintr runing
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aursiber committed Jul 31, 2024
1 parent d04ec55 commit eaf6cfe
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions vignettes/runLifemapR.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -55,8 +55,8 @@ LM_eukaryotes <- build_Lifemap(eukaryotes_1000, "ncbi")
```

```{r printLF, eval = TRUE, echo = FALSE}
if(is.lifemap_obj(LM_eukaryotes))
LM_eukaryotes$df[6:10,1:5]
if (is.lifemap_obj(LM_eukaryotes))
LM_eukaryotes$df[6:10, 1:5]
```

You can then transform this dataframe into a format suitable for the visualisation functions of the package with the ```build_Lifemap``` function.\
Expand Down Expand Up @@ -203,7 +203,7 @@ We can also represent markers and subtree at the same time
```{r, eval = FALSE}
# Visualisation of the Genome size on the fillColor and the TEcontent on the size of markers.
lifemap(LM_gen) +
lm_branches()
lm_branches() +
lm_markers(var_fillColor = "Genome_size", fillColor = "PiYG", radius = "TEcontent_bp", FUN = mean)
```

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