Version update (#71)

* update docs before pinning a version

* update version numbers, add lgtm to readme

* add last example to the appropriate README

* make Alpha version clear

* switch consortium to initiative

README.md

@@ -4,7 +4,7 @@
 
 This repository contains a variety of tools that will be useful in automating the process
 of chemical perception for the new SMIRKS Native Open Force Field (SMIRNOFF) format
-as a part of the [Open Force Field Consortium](http://openforcefield.org) [1].
+as a part of the [Open Force Field Initiative](http://openforcefield.org) [1].
 
 This idea originated from the tools [SMARTY and SMIRKY](https://github.com/openforcefield/smarty) which
 were designed to use an automated monte carlo algorithm to sample the chemical perception used