GitHub - Moldia/tumor_heterogeneity: scripts used in "Spatially resolved gene expression profiling identifies intratumoral diagnostic and prognostic heterogeneity in breast cancer."

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scripts used in "Spatially resolved gene expression profiling identifies intratumoral diagnostic and prognostic heterogeneity in breast cancer."

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Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
lib		lib
BatchHexBin.m		BatchHexBin.m
GetROIImageCellsOrReads.m		GetROIImageCellsOrReads.m
OncotypeDX_for_all_withR.m		OncotypeDX_for_all_withR.m
OverlayTwoDensities.m		OverlayTwoDensities.m
PooledtSNE.m		PooledtSNE.m
README.txt		README.txt
ROI_draw_onDensity.m		ROI_draw_onDensity.m
tSNEColorVisualization.m		tSNEColorVisualization.m
tSNEValidation.m		tSNEValidation.m

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This repository contains miscellaneous scripts used in manuscript "Spatially resolved gene expression profiling identifies intratumoral diagnostic
and prognostic heterogeneity in breast cancer" 
Dependency: in_situ_seq (https://github.com/Moldia/in_situ_seq)