Clean-up to pass pre-commit checks

cesm_scripts/generate_cupid_config_file.py

@@ -1,37 +1,38 @@
 #!/usr/bin/env python3
+from __future__ import annotations
 
-#import packages
-import yaml
-from standard_script_setup import *
 import os
+
+import yaml
 from CIME.case import Case
+from standard_script_setup import *  # noqa: F401,F403
 
-#Create variable for the caseroot environment variable
+# Create variable for the caseroot environment variable
 caseroot = os.getcwd()
-#Open the config.yml file and create a dictionary with safe_load from the yaml package
-with open('config_template.yml') as f: 
+# Open the config.yml file and create a dictionary with safe_load from the yaml package
+with open("config_template.yml") as f:
     my_dict = yaml.safe_load(f)
 
 # get environment cesm case variables
 with Case(caseroot, read_only=False, record=True) as case:
-    cime_case = case.get_value('CASE')
-    #create variable to access cesm_output_dir
-    outdir = case.get_value('DOUT_S_ROOT')
+    cime_case = case.get_value("CASE")
+    # create variable to access cesm_output_dir
+    outdir = case.get_value("DOUT_S_ROOT")
 
-my_dict['global_params']['case_name'] = cime_case
-my_dict['timeseries']['case_name'] = cime_case
+my_dict["global_params"]["case_name"] = cime_case
+my_dict["timeseries"]["case_name"] = cime_case
 
-#create variable user to access the user environment variable
-user = os.environ['USER']
-#replace USER with the environment variable
-#my_dict['data_sources']['nb_path_root'] = f'/glade/u/home/{user}/CUPiD/examples/nblibrary'
+# create variable user to access the user environment variable
+user = os.environ["USER"]
+# replace USER with the environment variable
+# my_dict['data_sources']['nb_path_root'] = f'/glade/u/home/{user}/CUPiD/examples/nblibrary'
 
-#replace with environment variable
-my_dict['global_params']['CESM_output_dir'] = outdir
+# replace with environment variable
+my_dict["global_params"]["CESM_output_dir"] = outdir
 
-#create new file, make it writeable 
-with open('config.yml', "w") as f:
-    #write a comment
+# create new file, make it writeable
+with open("config.yml", "w") as f:
+    # write a comment
     f.write("# sample comment\n")
-    #enter in each element of the dictionary into the new file
-    yaml.dump(my_dict, f)
+    # enter in each element of the dictionary into the new file
+    yaml.dump(my_dict, f)