CI updates (#38)

* update Intel.yml * update main.yml * update Spack.yml * fix main.yml Intel.yml * add recipe check action
NOAA-EMC · Jul 2, 2024 · 46d7912 · 46d7912
1 parent a940431
commit 46d7912
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diff --git a/.github/workflows/Intel.yml b/.github/workflows/Intel.yml
@@ -7,72 +7,49 @@ on:
     branches:
     - develop
 
-# Use custom shell with -l so .bash_profile is sourced which loads intel/oneapi/setvars.sh
-# without having to do it in manually every step
-defaults:
-  run:
-    shell: bash -leo pipefail {0}
-
 jobs:
   Intel:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        compilers: ["CC=icc FC=ifort", "CC=icx FC=ifx"]
+        compilers: ["oneapi", "classic"]
 
     steps:
 
-    # See https://software.intel.com/content/www/us/en/develop/articles/oneapi-repo-instructions.html
-    - name: install-intel
-      run: |
-        cd /tmp
-        wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
-        sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
-        rm GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
-        echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
-        sudo apt-get update
-        sudo apt-get install intel-oneapi-compiler-fortran intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic
-        echo "source /opt/intel/oneapi/setvars.sh" >> ~/.bash_profile
+    - name: "Install Intel"
+      uses: NOAA-EMC/ci-install-intel-toolkit@develop
+      with:
+        compiler-setup: ${{ matrix.compilers }}
 
     - name: checkout-pfunit
-      uses: actions/checkout@v2
+      uses: actions/checkout@v4
       with:
         repository: Goddard-Fortran-Ecosystem/pFUnit
         path: pfunit
 
     - name: cache-pfunit
       id: cache-pfunit
-      uses: actions/cache@v2
+      uses: actions/cache@v4
       with:
         path: ~/pfunit
         key: pfunit-${{ runner.os }}-${{ matrix.compilers }}
 
     - name: build-pfunit
       if: steps.cache-pfunit.outputs.cache-hit != 'true'
       run: |
-        cd pfunit
-        mkdir build
-        cd build
-        ${{ matrix.compilers }} cmake .. -DSKIP_MPI=YES -DSKIP_ESMF=YES -DSKIP_FHAMCREST=YES -DCMAKE_INSTALL_PREFIX=~/pfunit -DCMAKE_BUILD_TYPE=Release
-        make -j2 VERBOSE=1
-        make install
+        cmake -S pfunit -B pfunit/build -DSKIP_MPI=YES -DSKIP_ESMF=YES -DSKIP_FHAMCREST=YES -DCMAKE_INSTALL_PREFIX=~/pfunit -DCMAKE_BUILD_TYPE=Release
+        cmake --build pfunit/build --parallel 2 --verbose
+        cmake --install pfunit/build
 
     - name: checkout
       uses: actions/checkout@v4
       with: 
         path: sfcio
-        submodules: true
 
     - name: build
       run: |
-        cd sfcio
-        mkdir build 
-        cd build
-        ${{ matrix.compilers }} cmake .. -DENABLE_TESTS=ON -DCMAKE_PREFIX_PATH="~/pfunit"
-        make -j2 VERBOSE=1
+        cmake -S sfcio -B sfcio/build -DENABLE_TESTS=ON -DCMAKE_PREFIX_PATH="~/pfunit"
+        cmake --build sfcio/build --parallel 2 --verbose
     
     - name: test
-      run: |
-        cd $GITHUB_WORKSPACE/sfcio/build
-        make test VERBOSE=1
-
+      run: ctest --test-dir sfcio/build --verbose
diff --git a/.github/workflows/Spack.yml b/.github/workflows/Spack.yml
@@ -25,43 +25,26 @@ jobs:
 
     steps:
 
-    - name: checkout-sfcio
-      uses: actions/checkout@v4
-      with: 
-        path: sfcio
-
-    - name: spack-build-and-test
-      run: |
-        git clone -c feature.manyFiles=true https://github.com/jcsda/spack
-        . spack/share/spack/setup-env.sh
-        spack env create sfcio-env
-        spack env activate sfcio-env
-        cp $GITHUB_WORKSPACE/sfcio/spack/package.py $SPACK_ROOT/var/spack/repos/builtin/packages/sfcio/package.py
-        spack develop --no-clone --path $GITHUB_WORKSPACE/sfcio sfcio@develop
-        spack add sfcio@develop%gcc@11 +pfunit
-        spack external find cmake gmake m4 python
-        spack concretize
-        # Run installation and run pFunit testing
-        spack install --verbose --fail-fast --test root
-        # Run 'spack load' to check for obvious errors in setup_run_environment
-        spack load sfcio
-        ls $SFCIO_LIB
+    - name: "Build Spack package"
+      uses: NOAA-EMC/ci-test-spack-package@develop
+      with:
+        package-name: sfcio
+        package-variants: +pfunit
+        custom-recipe: spack/package.py
+        use-repo-cache: true
+        spack-compiler: gcc
+        spack-externals: cmake gmake python perl m4
+        repo-cache-key-suffix: ${{ matrix.os }}-${{ matrix.variants }}-1
 
   # This job validates the Spack recipe by making sure each cmake build option is represented
   recipe-check:
     runs-on: ubuntu-latest
 
     steps:
 
-    - name: checkout-sfcio
-      uses: actions/checkout@v4
-      with: 
-        path: sfcio
-
     - name: recipe-check
-      run: |
-        echo "If this jobs fails, look at the most recently output CMake option below and make sure that option appears in spack/package.py"
-        for opt in $(grep -ioP '^option\(\K(?!(ENABLE_DOCS))[^ ]+' $GITHUB_WORKSPACE/sfcio/CMakeLists.txt) ; do
-          echo "Checking for presence of '$opt' CMake option in package.py"
-          grep -cP "define.+\b${opt}\b" $GITHUB_WORKSPACE/sfcio/spack/package.py
-        done
+      uses: NOAA-EMC/ci-check-spack-recipe@develop
+      with:
+        recipe-file: package/spack/package.py
+        cmakelists-txt: package/CMakeLists.txt
+        ignore-list: ENABLE_DOCS
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -3,51 +3,42 @@ on: [push, pull_request]
 
 jobs:
   build:
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     env:
-      FC: gfortran-9
-      CC: gcc-9
+      FC: gfortran-11
+      CC: gcc-11
 
     steps:
 
     - name: checkout-pfunit
-      uses: actions/checkout@v2
+      uses: actions/checkout@v4
       with:
         repository: Goddard-Fortran-Ecosystem/pFUnit
         path: pfunit
 
     - name: cache-pfunit
       id: cache-pfunit
-      uses: actions/cache@v2
+      uses: actions/cache@v4
       with:
         path: ~/pfunit
         key: pfunit-${{ runner.os }}-${{ hashFiles('pfunit/VERSION') }}
 
     - name: build-pfunit
       if: steps.cache-pfunit.outputs.cache-hit != 'true'
       run: |
-        cd pfunit
-        mkdir build
-        cd build
-        cmake .. -DSKIP_MPI=YES -DSKIP_ESMF=YES -DSKIP_FHAMCREST=YES -DCMAKE_INSTALL_PREFIX=~/pfunit
-        make -j2
-        make install
+        cmake -S pfunit -B pfunit/build -DSKIP_MPI=YES -DSKIP_ESMF=YES -DSKIP_FHAMCREST=YES -DCMAKE_INSTALL_PREFIX=~/pfunit
+        cmake --build pfunit/build --parallel 2 --verbose
+        cmake --install pfunit/build
 
     - name: checkout
-      uses: actions/checkout@v2
+      uses: actions/checkout@v4
       with: 
         path: sfcio
-        submodules: true
 
     - name: build
       run: |
-        cd sfcio
-        mkdir build 
-        cd build
-        cmake .. -DENABLE_TESTS=ON -DCMAKE_PREFIX_PATH="~/pfunit;~/"
-        make -j2
+        cmake -S sfcio -B sfcio/build -DENABLE_TESTS=ON -DCMAKE_PREFIX_PATH="~/pfunit;~/"
+        cmake --build sfcio/build
     
     - name: test
-      run: |
-        cd $GITHUB_WORKSPACE/sfcio/build
-        make test
+      run: ctest --test-dir sfcio/build --output-on-failure