add tests

tests/integration/io/test_read.py

@@ -0,0 +1,48 @@
+from pathlib import Path
+import tempfile
+
+from pynwb import read_nwb
+from pynwb.testing.mock.file import mock_NWBFile
+from pynwb.testing import TestCase
+
+import unittest
+try:
+    from hdmf_zarr import NWBZarrIO  # noqa f401
+    HAVE_NWBZarrIO = True 
+except ImportError:
+    HAVE_NWBZarrIO = False
+
+
+class TestReadNWBMethod(TestCase):
+    """
+    Test that H5DataIO functions correctly on round trip with the HDF5IO backend
+    """
+    def setUp(self):
+        self.nwbfile = mock_NWBFile()
+
+
+    def test_read_nwb_hdf5(self):
+        from pynwb import NWBHDF5IO
+
+        with tempfile.TemporaryDirectory() as temp_dir:
+            path = Path(temp_dir) / "test.nwb"
+            with NWBHDF5IO(path, 'w') as io:
+                io.write(self.nwbfile)
+
+            read_nwbfile = read_nwb(path=path)
+            self.assertContainerEqual(read_nwbfile, self.nwbfile)
+            read_nwbfile.get_read_io().close()
+
+    @unittest.skipIf(not HAVE_NWBZarrIO, "NWBZarrIO library not available")
+    def test_read_zarr(self):
+        # from pynwb import NWBZarrIO
+        from hdmf_zarr import NWBZarrIO
+
+        with tempfile.TemporaryDirectory() as temp_dir:
+            path = Path(temp_dir) / "test.nwb"
+            with NWBZarrIO(path, 'w') as io:
+                io.write(self.nwbfile)
+
+            read_nwbfile = read_nwb(path=path)
+            self.assertContainerEqual(read_nwbfile, self.nwbfile)
+            read_nwbfile.get_read_io().close()