Merge pull request #993 from ORNL/release_June_2024

Release june 2024

.github/pull_request_template.md

@@ -0,0 +1,12 @@
+# PR Description
+
+
+# Tasks
+
+* [ ] - A description of the PR has been provided, and a diagram included if it is a new feature.
+* [ ] - Formatter has been run
+* [ ] - CHANGELOG comment has been added
+* [ ] - Labels have been assigned to the pr
+* [ ] - A reviwer has been added
+* [ ] - A user has been assigned to work on the pr
+* [ ] - If new feature a unit test has been added

.github/workflows/format-check.yml

@@ -28,10 +28,10 @@ jobs:
       - name: Install dependencies
         run: |
           sudo apt-get install -y python3-sphinx sphinx-rtd-theme-common
-          pip install sphinx_rtd_theme recommonmark flake8 black pytest pytest-cov
+          pip install sphinx_rtd_theme recommonmark flake8 black pytest pytest-cov black[jupyter]
       - name: Black formatting checks
-        run: black --check .
+        run: black  --exclude '/jupyter_notebooks/' --check .
       - name: Lint with flake8
         run: |
-          flake8 --count --select=E9,F63,F7,F82 --show-source --statistics .
-          flake8 --count --statistics .
+          flake8 --count --select=E9,F63,F7,F82 --show-source --statistics --max-line-length 100 .
+          flake8 --count --statistics --max-line-length 100 .

.github/workflows/unit-tests.yml

@@ -10,6 +10,7 @@ jobs:
         run: sudo apt-get update
       - name: Install dependencies
         run: |
+          ./scripts/generate_datafed.sh
           sudo ./scripts/install_core_dependencies.sh
           ./scripts/generate_datafed.sh
       - name: Build

.gitignore

@@ -1,6 +1,16 @@
 /.idea/
 build
+cmake/sodium_version
+cmake/curl_version
+cmake/zlib_version
 common/proto/common/Version.proto
+compose/metadata/.build-args
+compose/**/.env
+compose/**/.env*
+compose/**/globus
+compose/**/keys
+compose/**/logs
+compose/**/unset_env.sh
 config/datafed.sh
 config/datafed-authz.cfg
 config/datafed-core.cfg
@@ -9,18 +19,58 @@ config/datafed-ws.cfg
 core/database/foxx/api/version_router.js
 core/database/foxx/manifest.json
 core/server/Version.hpp
+dependencies
+docs/.buildinfo
+docs/.doctrees/
+docs/.nojekyll
+external/cppzmq/
+external/globus-connect-server-deploy
+external/json-schema-validator/
+external/json/
+external/libcurl/
+external/libsodium/
+external/libzmq/
+external/openssl/
+external/protobuf/
+external/zlib/
 python/datafed_pkg/datafed/VERSION.py
+python/datafed_pkg/datafed.egg-info/
+python/datafed_pkg/datafed/SDMS_Anon_pb2.py
+python/datafed_pkg/datafed/SDMS_Auth_pb2.py
+python/datafed_pkg/datafed/SDMS_pb2.py
+python/datafed_pkg/datafed/Version_pb2.py
+python/datafed_pkg/datafed/__pycache__/
+python/datafed_pkg/dist/
+web/package.json
 repository/gridftp/globus5/authz/source/Version.hpp
 repository/server/Version.hpp
 scripts/globus/datafed-home-repo.sh
 scripts/globus/datafed-home-repo-form.json
 scripts/globus/mapping.json
+scripts/admin_datafed_backup.sh
+scripts/admin_refresh_certs.sh
+scripts/globus/__pycache__
 services/
+tmp/
 web/SDMS.proto
 web/SDMS_Anon.proto
 web/SDMS_Auth.proto
 web/version.js
 web/Version.proto
 web/datafed-core-key.pub
 web/node_modules/
+web/package-lock.json
 web/static/datafed-core-key.pub
+*.swp
+*.swo
+
+# for web tests
+tests/end-to-end/web-UI/node_modules/
+tests/end-to-end/web-UI/test-results/
+tests/end-to-end/web-UI/playwright-report/
+tests/end-to-end/web-UI/blob-report/
+tests/end-to-end/web-UI/playwright/.cache/
+tests/end-to-end/web-UI/tests-examples
+tests/end-to-end/web-UI/.auth
+tests/end-to-end/web-UI/.env
+tests/end-to-end/web-UI/auth.setup.js