Merge pull request #14 from OpenSourceBrain/debug/netpyne #56
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| name: Python install and test | |
| on: | |
| push: | |
| branches: [ "main", "development" ] | |
| pull_request: | |
| branches: [ "main", "development" ] | |
| permissions: | |
| contents: read | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.runs-on }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.7", "3.9", "3.10", "3.11"] | |
| runs-on: [ubuntu-latest, windows-latest, macos-latest] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install | |
| run: | | |
| pip install . | |
| - name: Set up config non windows | |
| env: | |
| NSGR_USERNAME: ${{ secrets.NSGR_USERNAME }} | |
| NSGR_PASSWORD: ${{ secrets.NSGR_PASSWORD }} | |
| NSGR_APPID: ${{ secrets.NSGR_APPID }} | |
| if: ${{ matrix.runs-on != 'windows-latest' }} | |
| run: | | |
| echo "APPNAME=PY_EXPANSE" > nsgrest.conf | |
| echo "URL=https://nsgr.sdsc.edu:8443/cipresrest/v1" >> nsgrest.conf | |
| echo "USERNAME=${NSGR_USERNAME}" >> nsgrest.conf | |
| echo "PASSWORD=${NSGR_PASSWORD}" >> nsgrest.conf | |
| echo "APPID=${NSGR_APPID}" >> nsgrest.conf | |
| more nsgrest.conf # print contents so far... | |
| - name: Set up config windows | |
| env: | |
| NSGR_USERNAME: ${{ secrets.NSGR_USERNAME }} | |
| NSGR_PASSWORD: ${{ secrets.NSGR_PASSWORD }} | |
| NSGR_APPID: ${{ secrets.NSGR_APPID }} | |
| if: ${{ matrix.runs-on == 'windows-latest' }} | |
| run: | | |
| echo "APPNAME=PY_EXPANSE" > nsgrest.conf | |
| echo "URL=https://nsgr.sdsc.edu:8443/cipresrest/v1" >> nsgrest.conf | |
| $outtext_username = "USERNAME=$($env:NSGR_USERNAME)" | |
| $outtext_username | Out-File -FilePath "nsgrest.conf" -Append | |
| $outtext_password = "PASSWORD=$($env:NSGR_PASSWORD)" | |
| $outtext_password | Out-File -FilePath "nsgrest.conf" -Append | |
| $outtext_appid = "APPID=$($env:NSGR_APPID)" | |
| $outtext_appid | Out-File -FilePath "nsgrest.conf" -Append | |
| more nsgrest.conf # print contents so far... | |
| - name: Version info | |
| run: | | |
| pip list | |
| - name: Test listing | |
| run: | | |
| nsgr_job -c nsgrest.conf -l | |
| - name: Test submission non windows | |
| if: ${{ matrix.runs-on != 'windows-latest' }} | |
| run: | | |
| cd example && nsgr_submit -c ../nsgrest.conf . validate && nsgr_submit -c ../nsgrest.conf . run && cd NGBW* && tar -xvf output.tar.gz && echo "" && echo "" && echo "Output file contents:" && echo "" && cd example_dir && cat output.txt | |
| - name: Test submission windows | |
| if: ${{ matrix.runs-on == 'windows-latest' }} | |
| run: | | |
| cd example && nsgr_submit -c ..\nsgrest.conf . validate && nsgr_submit -c ..\nsgrest.conf . run && cd NGBW* && tar -xvf output.tar.gz && echo "" && echo "" && echo "Output file contents:" && echo "" && cd example_dir && cat output.txt |