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Fixing typo.
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@odiazib
odiazib committed Oct 16, 2024
1 parent 241403e commit aa416f1
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Showing 8 changed files with 47 additions and 47 deletions.
12 changes: 6 additions & 6 deletions src/examples/TChem_AerosolChemistry.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -173,24 +173,24 @@ int main(int argc, char *argv[]) {
// read scenario condition from yaml file
// read scenario condition from yaml file
real_type_2d_view_host state_scenario_host;
ordinal_type nbacth_files=1;
ordinal_type nbatch_files=1;
printf("conditions parsing ...\n");
TChem::AtmChemistry::setScenarioConditions(inputFile,
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbacth_files);
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbatch_files);
printf("Number of const species %d \n", kmcd.nConstSpec);

real_type_2d_view_host num_concentration_host;
real_type_2d_view_host state_host;


// scenario particles
amd.scenarioConditionParticles(input_file_particles, nbacth_files, num_concentration_host, state_scenario_host);
amd.scenarioConditionParticles(input_file_particles, nbatch_files, num_concentration_host, state_scenario_host);

real_type_2d_view num_concentration;
real_type_2d_view state;

if (nbacth_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbacth_files is 1
if (nbatch_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbatch_files is 1
printf("-------------------------------------------------------\n");
printf("--------------------Warning----------------------------\n");
printf("Using cloned samples ... only for numerical experiments\n");
Expand All @@ -210,7 +210,7 @@ int main(int argc, char *argv[]) {
TChem::Test::cloneView(num_concentration);

} else {
nBatch = nbacth_files;
nBatch = nbatch_files;
state = real_type_2d_view("StateVector Devices", nBatch, stateVecDim);
Kokkos::deep_copy(state, state_scenario_host);
state_host = state_scenario_host;
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12 changes: 6 additions & 6 deletions src/examples/TChem_AerosolChemistry_CVODE.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -173,19 +173,19 @@ int main(int argc, char *argv[]) {
// read scenario condition from yaml file
// read scenario condition from yaml file
real_type_2d_view_host state_scenario_host;
ordinal_type nbacth_files=1;
ordinal_type nbatch_files=1;
printf("conditions parsing ...\n");
TChem::AtmChemistry::setScenarioConditions(inputFile,
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbacth_files);
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbatch_files);
const ordinal_type n_active_vars = total_n_species - kmcd.nConstSpec;
printf("Number of const species %d \n", kmcd.nConstSpec);

real_type_2d_view_host num_concentration_scenario, num_concentration;
amd.scenarioConditionParticles(input_file_particles, nbacth_files, num_concentration_scenario, state_scenario_host);
amd.scenarioConditionParticles(input_file_particles, nbatch_files, num_concentration_scenario, state_scenario_host);

real_type_2d_view_host state;
if (nbacth_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbacth_files is 1
if (nbatch_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbatch_files is 1
printf("-------------------------------------------------------\n");
printf("--------------------Warning----------------------------\n");
printf("Using cloned samples ... only for numerical experiments\n");
Expand All @@ -203,7 +203,7 @@ int main(int argc, char *argv[]) {
TChem::Test::cloneView(num_concentration);

} else {
nBatch = nbacth_files;
nBatch = nbatch_files;
state = state_scenario_host;

// scenario particles
Expand Down
14 changes: 7 additions & 7 deletions src/examples/TChem_AtmosphericChemistryE3SM.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -153,16 +153,16 @@ int main(int argc, char *argv[]) {
// read scenario condition from yaml file
// read scenario condition from yaml file
real_type_2d_view_host state_scenario_host;
ordinal_type nbacth_files=0;
ordinal_type nbatch_files=0;
TChem::AtmChemistry::setScenarioConditions(inputFile,
speciesNamesHost, kmcd.nSpec,stateVecDim, state_scenario_host, nbacth_files);
speciesNamesHost, kmcd.nSpec,stateVecDim, state_scenario_host, nbatch_files);

// read photolysis reaction values
// we assume photolysis reaction are computed by another tool.
real_type_2d_view_host photo_rates_scenario_host;
ordinal_type n_photo_rates = 0;
TChem::AtmChemistry::setScenarioConditionsPhotolysisReactions(inputFile,
nbacth_files,
nbatch_files,
// output
photo_rates_scenario_host,
n_photo_rates
Expand All @@ -174,7 +174,7 @@ int main(int argc, char *argv[]) {
printf("Number of species %d \n", kmcd.nSpec);
printf("Number of const species %d \n", kmcd.nConstSpec);
// Note: We allocate external_sources_scenario_host
real_type_2d_view_host external_sources_scenario_host("external_sources_host",nbacth_files,n_active_vars);
real_type_2d_view_host external_sources_scenario_host("external_sources_host",nbatch_files,n_active_vars);
TChem::AtmChemistry::setScenarioConditionsExternalForcing(inputFile,
speciesNamesHost,
// output
Expand All @@ -186,8 +186,8 @@ int main(int argc, char *argv[]) {
real_type_2d_view_host state_host;
real_type_2d_view external_sources;

if (nbacth_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbacth_files is 1
if (nbatch_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbatch_files is 1
printf("-------------------------------------------------------\n");
printf("--------------------Warning----------------------------\n");
printf("Using cloned samples ... only for numerical experiments\n");
Expand Down Expand Up @@ -224,7 +224,7 @@ int main(int argc, char *argv[]) {
}

} else {
nBatch = nbacth_files;
nBatch = nbatch_files;
state = real_type_2d_view("StateVector Devices", nBatch, stateVecDim);
Kokkos::deep_copy(state, state_scenario_host);
state_host = state_scenario_host;
Expand Down
14 changes: 7 additions & 7 deletions src/examples/TChem_AtmosphericChemistryE3SM_CVODE.cpp
View file
Original file line number Diff line number Diff line change
Expand Up @@ -152,16 +152,16 @@ int main(int argc, char *argv[]) {
// read scenario condition from yaml file
// read scenario condition from yaml file
real_type_2d_view_host state_scenario_host;
ordinal_type nbacth_files=0;
ordinal_type nbatch_files=0;
TChem::AtmChemistry::setScenarioConditions(inputFile,
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbacth_files);
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbatch_files);

// read photolysis reaction values
// we assume photolysis reaction are computed by another tool.
real_type_2d_view_host photo_rates_scenario_host;
ordinal_type n_photo_rates = 0;
TChem::AtmChemistry::setScenarioConditionsPhotolysisReactions(inputFile,
nbacth_files,
nbatch_files,
// output
photo_rates_scenario_host,
n_photo_rates
Expand All @@ -173,7 +173,7 @@ int main(int argc, char *argv[]) {
printf("Number of species %d \n", kmcd.nSpec);
printf("Number of const species %d \n", kmcd.nConstSpec);
// Note: We allocate external_sources_scenario_host
real_type_2d_view_host external_sources_scenario_host("external_sources_host",nbacth_files,n_active_vars);
real_type_2d_view_host external_sources_scenario_host("external_sources_host",nbatch_files,n_active_vars);
TChem::AtmChemistry::setScenarioConditionsExternalForcing(inputFile,
speciesNamesHost,
// output
Expand All @@ -184,8 +184,8 @@ int main(int argc, char *argv[]) {
real_type_2d_view_host photo_rates;
real_type_2d_view_host external_sources;

if (nbacth_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbacth_files is 1
if (nbatch_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbatch_files is 1
printf("-------------------------------------------------------\n");
printf("--------------------Warning----------------------------\n");
printf("Using cloned samples ... only for numerical experiments\n");
Expand Down Expand Up @@ -216,7 +216,7 @@ int main(int argc, char *argv[]) {
}

} else {
nBatch = nbacth_files;
nBatch = nbatch_files;
state = state_scenario_host;

if (n_photo_rates > 0 )
Expand Down
2 changes: 1 addition & 1 deletion src/examples/TChem_Linozv3_StratosphereChemSolver.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -373,7 +373,7 @@ void linv3_stratosphere_solver_test( const int team_size,
if (team_size > 0 && vector_size > 0) {
policy = policy_type(exec_space_instance, nBatch, team_size, vector_size);
} else if (team_size > 0 && vector_size < 0) {
// only set team size
// only set team size
policy = policy_type(exec_space_instance, nBatch, team_size);
}

Expand Down
16 changes: 8 additions & 8 deletions src/examples/TChem_NetProductionRates.cpp
View file
Original file line number Diff line number Diff line change
Expand Up @@ -82,17 +82,17 @@ int main(int argc, char *argv[]) {

// read scenario condition from yaml file
real_type_2d_view_host state_scenario_host;
ordinal_type nbacth_files=0;
ordinal_type nbatch_files=0;
TChem::AtmChemistry::setScenarioConditions(inputFile,
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbacth_files);
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbatch_files);


// read photolysis reaction values
// we assume photolysis reaction are computed by another tool.
real_type_2d_view_host photo_rates_scenario_host;
ordinal_type n_photo_rates = 0;
TChem::AtmChemistry::setScenarioConditionsPhotolysisReactions(inputFile,
nbacth_files,
nbatch_files,
// output
photo_rates_scenario_host,
n_photo_rates
Expand All @@ -105,7 +105,7 @@ int main(int argc, char *argv[]) {
printf("Number of species %d \n", kmcd.nSpec);
printf("Number of const species %d \n", kmcd.nConstSpec);
// Note: We allocate external_sources_scenario_host
real_type_2d_view_host external_sources_scenario_host("external_sources_host",nbacth_files,n_active_vars);
real_type_2d_view_host external_sources_scenario_host("external_sources_host",nbatch_files,n_active_vars);
TChem::AtmChemistry::setScenarioConditionsExternalForcing(inputFile,
speciesNamesHost,
// output
Expand All @@ -116,8 +116,8 @@ int main(int argc, char *argv[]) {
real_type_2d_view photo_rates;
real_type_2d_view external_sources;

if (nbacth_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbacth_files is 1
if (nbatch_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbatch_files is 1
printf("-------------------------------------------------------\n");
printf("--------------------Warning----------------------------\n");
printf("Using cloned samples ... only for numerical experiments\n");
Expand Down Expand Up @@ -155,13 +155,13 @@ int main(int argc, char *argv[]) {
}

} else {
nBatch = nbacth_files;
nBatch = nbatch_files;
state = real_type_2d_view("StateVector Devices", nBatch, stateVecDim);
Kokkos::deep_copy(state, state_scenario_host);

if (n_photo_rates > 0 )
{
nBatch = nbacth_files;
nBatch = nbatch_files;
photo_rates = real_type_2d_view("StateVector Devices", nBatch, n_photo_rates);
Kokkos::deep_copy(photo_rates, photo_rates_scenario_host);

Expand Down
14 changes: 7 additions & 7 deletions src/examples/TChem_RateofProgress.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -84,16 +84,16 @@ int main(int argc, char *argv[]) {

// read scenario condition from yaml file
real_type_2d_view_host state_scenario_host;
ordinal_type nbacth_files=0;
ordinal_type nbatch_files=0;
TChem::AtmChemistry::setScenarioConditions(inputFile,
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbacth_files);
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbatch_files);

// read photolysis reaction values
// we assume photolysis reaction are computed by another tool.
real_type_2d_view_host photo_rates_scenario_host;
ordinal_type n_photo_rates = 0;
TChem::AtmChemistry::setScenarioConditionsPhotolysisReactions(inputFile,
nbacth_files,
nbatch_files,
// output
photo_rates_scenario_host,
n_photo_rates
Expand All @@ -102,8 +102,8 @@ int main(int argc, char *argv[]) {
real_type_2d_view state;
real_type_2d_view photo_rates;

if (nbacth_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbacth_files is 1
if (nbatch_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbatch_files is 1
printf("-------------------------------------------------------\n");
printf("--------------------Warning----------------------------\n");
printf("Using cloned samples ... only for numerical experiments\n");
Expand All @@ -127,13 +127,13 @@ int main(int argc, char *argv[]) {
} // n_photo_rates

} else {
nBatch = nbacth_files;
nBatch = nbatch_files;
state = real_type_2d_view("StateVector Devices", nBatch, stateVecDim);
Kokkos::deep_copy(state, state_scenario_host);

if (n_photo_rates > 0 )
{
nBatch = nbacth_files;
nBatch = nbatch_files;
photo_rates = real_type_2d_view("StateVector Devices", nBatch, n_photo_rates);
Kokkos::deep_copy(photo_rates, photo_rates_scenario_host);

Expand Down
10 changes: 5 additions & 5 deletions src/examples/TChem_ReactionRates.cpp
View file
Original file line number Diff line number Diff line change
Expand Up @@ -78,14 +78,14 @@ int main(int argc, char *argv[]) {

// read scenario condition from yaml file
real_type_2d_view_host state_scenario_host;
ordinal_type nbacth_files=0;
ordinal_type nbatch_files=0;
TChem::AtmChemistry::setScenarioConditions(chemFile,
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbacth_files);
speciesNamesHost, kmcd.nSpec, stateVecDim, state_scenario_host, nbatch_files);

real_type_2d_view state;

if (nbacth_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbacth_files is 1
if (nbatch_files == 1 && use_cloned_samples && nBatch > 1) {
// only clone samples if nbatch_files is 1
printf("-------------------------------------------------------\n");
printf("--------------------Warning----------------------------\n");
printf("Using cloned samples ... only for numerical experiments\n");
Expand All @@ -97,7 +97,7 @@ int main(int argc, char *argv[]) {
TChem::Test::cloneView(state_host);
Kokkos::deep_copy(state, state_host);
} else {
nBatch = nbacth_files;
nBatch = nbatch_files;
state = real_type_2d_view("StateVector Devices", nBatch, stateVecDim);
Kokkos::deep_copy(state, state_scenario_host);
}
Expand Down

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