Update file calls in calibration modules #375

	name: Build and test
	on:
	push:
	paths:
	- '**.yml'
	- '**.toml'
	- '**.ini'
	- '**.py'
	- '**.json'
	- '**.R'
	- '**.RData'
	- '**.csv'
	- '**.pkl'
	pull_request:
	paths:
	- '**.yml'
	- '**.toml'
	- '**.ini'
	- '**.py'
	- '**.json'
	- '**.R'
	- '**.RData'
	- '**.csv'
	- '**.pkl'
	jobs:
	build:
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: [ubuntu-latest, macos-latest]
	python-version: ["3.10", "3.11"]

	steps:
	- name: Checkout
	uses: actions/checkout@v4
	with:
	persist-credentials: false
	- name: Set up R ${{ matrix.r-version }}
	uses: r-lib/actions/setup-r@v2
	with:
	r-version: release
	- name: Setup Miniconda using Python ${{ matrix.python-version }}
	uses: conda-incubator/setup-miniconda@v3
	with:
	miniforge-variant: Mambaforge
	auto-update-conda: true
	activate-environment: ogusa-dev
	environment-file: environment.yml
	python-version: ${{ matrix.python-version }}
	auto-activate-base: false
	- name: Build
	shell: bash -l {0}
	run: \|
	pip install -e .
	- name: Test
	shell: bash -l {0}
	working-directory: ./
	run: \|
	python -m pytest -m "not local" --cov=./ --cov-report=xml
	- name: Upload coverage to Codecov
	if: matrix.os == 'ubuntu-latest' && contains(github.repository, 'PSLmodels/OG-USA')
	uses: codecov/codecov-action@v4
	with:
	files: ./coverage.xml
	flags: unittests
	name: codecov-umbrella
	token: ${{ secrets.CODECOV_TOKEN }}
	fail_ci_if_error: true
	verbose: true

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