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Merge pull request #3378 from PecanProject/fix_metdata_link
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Fix broken link to met-data documentation
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infotroph authored Sep 11, 2024
2 parents 79e32f4 + b3930b6 commit 4ac2433
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15 changes: 8 additions & 7 deletions book_source/03_topical_pages/02_pecan_standards.Rmd
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Expand Up @@ -10,11 +10,11 @@ Internal PEcAn standard time follows ISO_8601 format for dates and time (https:/

To aid in the conversion between PEcAn internal ISO_8601 standard and CF convention used in all met drivers and PEcAn standard output you can utilize the functions: "cf2datetime","datetime2doy","cf2doy", and for SIPNET "sipnet2datetime"

### Input Standards
## Input Standards

#### Meterology Standards
### Meteorology Standards

##### Dimensions:
#### Dimensions:


|CF standard-name | units |
Expand All @@ -26,7 +26,8 @@ To aid in the conversion between PEcAn internal ISO_8601 standard and CF convent
General Note: dates in the database should be date-time (preferably with timezone), and datetime passed around in PEcAn should be of type POSIXct.


##### The variable names should be `standard_name`
#### Variable names should be `standard_name`

```{r, echo=FALSE,warning=FALSE,message=FALSE}
names<-c("<b>air_temperature</b>", "air_temperature_max", "air_temperature_min", "<b>air_pressure</b>",
"mole_fraction_of_carbon_dioxide_in_air", "moisture_content_of_soil_layer", "soil_temperature ",
Expand Down Expand Up @@ -75,15 +76,15 @@ The key is to process each type of met data (site, reanalysis, forecast, climate

### Soils and Vegetation Inputs

##### Soil Data
#### Soil Data

See the [Soil Data] section on more into on creating a standard soil data file.

##### Vegetation Data
#### Vegetation Data

See the [Vegetation Data] section on more info on creating a standard vegetation data file

### Output Standards {#OutputStandards}
## Output Standards {#OutputStandards}

* created by `model2netcdf` functions
* based on format used by [MsTMIP](http://nacp.ornl.gov/MsTMIP_variables.shtml)
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2 changes: 1 addition & 1 deletion modules/data.atmosphere/README.md
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Expand Up @@ -32,7 +32,7 @@ The PEcAn.data.atmosphere package is 'standalone'.

## PEcAn variable names

See https://pecanproject.github.io/pecan-documentation/latest/met-data.html
For the most updated list, see https://pecanproject.github.io/pecan-documentation/latest/time-standard.html#input-standards

General Note: dates in the database should be datatime (preferably with timezone), and datetime passed around in PEcAn should be of type POSIXlt.

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