update wget and apt

PecanProject · Sep 27, 2024 · fcfca38 · fcfca38
1 parent dd2fece
commit fcfca38
Showing 1 changed file with 73 additions and 0 deletions.
diff --git a/models/fates/Dockerfile b/models/fates/Dockerfile
@@ -6,6 +6,79 @@ ARG IMAGE_VERSION="latest"
 # ----------------------------------------------------------------------
 FROM pecan/models:${IMAGE_VERSION} as model-binary 
 
+# Command from pecan/models image
+RUN apt update && apt upgrade -y
+RUN apt install -y \
+    sudo \
+    build-essential \
+    python3-dev \
+    cmake \
+    gfortran-9 \
+    zlib1g-dev \
+    byacc \
+    libblas-dev \
+    liblapack-dev \
+    libxml2-utils \
+    libxml-libxml-perl \
+    libgdal-dev \
+    xmlstarlet \
+    csh \
+    diffutils \
+    rsync
+
+RUN wget -q http://www.mpich.org/static/downloads/3.3.2/mpich-3.3.2.tar.gz && \
+    tar zxf mpich-3.3.2.tar.gz && \
+    cd mpich-3.3.2 && \
+    ./configure --prefix=/usr/local && \
+    make -j 2 install
+
+RUN  wget -q https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.12/hdf5-1.12.0/src/hdf5-1.12.0.tar.gz && \
+     tar zxf hdf5-1.12.0.tar.gz && \
+     cd hdf5-1.12.0 && \
+     ./configure --prefix=/usr/local && \
+     make -j 2 install
+
+## no response!
+RUN  wget -q ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-c-4.7.4.tar.gz  && \
+     tar zxf netcdf-c-4.7.4.tar.gz && \
+     cd netcdf-c-4.7.4 && \
+     ./configure --prefix=/usr/local && \
+     make -j 2 install && \
+     ldconfig
+
+RUN  wget -q ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-fortran-4.5.3.tar.gz && \
+     tar zxf netcdf-fortran-4.5.3.tar.gz && \
+     cd netcdf-fortran-4.5.3 && \
+     ./configure --prefix=/usr/local && \
+     make -j 2 install && \
+     ldconfig
+
+## get response
+RUN  wget -q https://parallel-netcdf.github.io/Release/pnetcdf-1.12.1.tar.gz && \
+     tar zxf pnetcdf-1.12.1.tar.gz && \
+     cd pnetcdf-1.12.1 && \
+     ./configure MPIF77=/usr/local/bin/mpif77 MPIF90=/usr/local/bin/mpif90 MPICXX=/usr/local/bin/mpicxx MPICC=/usr/local/bin/mpicc && \
+     make -j 2 install && \
+     ldconfig
+
+RUN wget -q https://github.com/esmf-org/esmf/archive/refs/tags/ESMF_8_2_0.tar.gz && \
+    tar zxf ESMF_8_2_0.tar.gz && \
+    cd esmf-ESMF_8_2_0 && \
+    export ESMF_DIR='/tmp/sources/esmf-ESMF_8_2_0' && \
+    export ESMF_INSTALL_PREFIX='/usr/local' && \
+    export ESMF_LAPACK="netlib" && \
+    export ESMF_LAPACK_LIBS="-llapack -lblas" && \
+    export ESMF_LAPACK_LIBPATH="/usr/lib" && \
+    export ESMF_NETCDF="nc-config" && \
+    gmake && \
+    gmake install && \
+    ldconfig
+
+
+
+
+
+
 # Some variables that can be used to set control the docker build
 ARG MODEL_VERSION=git