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1. ALL-BM-scMultiomics-BD-Rhapsody ALL-BM-scMultiomics-BD-Rhapsody Public

2. TCRscape TCRscape Public

   TCRscape - a tool for simultaneous multimodal gene expression and clonotype analysis of single T-cells profiled via the BD Rhapsody system.

   Jupyter Notebook

3. ErythroOrigin ErythroOrigin Public

   Predict human Erythroid cell tissue of origin using the BD Rhapsody single cell Immune responce panel gene expression data

   Jupyter Notebook

4. Visium-Deconvolution-based-clustering Visium-Deconvolution-based-clustering Public

   Convert your STDeconvolve-generated and EnrichR-decoded topics into Seurat spatial clustering information via AUCell

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5. BulkOmicsTools BulkOmicsTools Public

   Perform PCA, clustering and correlation analyses of the bulk omics data.

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6. TNF-scMultiomics-BD-Rhapsody TNF-scMultiomics-BD-Rhapsody Public

   In this study, we incubated PBMCs from healthy donors and rheumatoid arthritis patients with Tumor Necrosis Factor Alpha and then performed their single-cell multi-omics analysis via BD Rhapsody.

   Jupyter Notebook