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First draft of October 2023 newsletter #710

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211 changes: 211 additions & 0 deletions _newsletters/2023-10-05-newsletter.md
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---
layout: post
title: Summer 2023 Newsletter
editor: Robert Chisholm
slug: 2023-07-21-newsletter
date: 2023-07-21T00:00:00Z+0100
tags:
category:
link:
description:
type: text
---

## The University of Sheffield Research Software Engineering Community Newsletter October 2023

Welcome to the October 2023 newsletter for the research software community at The University of Sheffield, featuring
news, opportunities, events and training for you.

### News, Web & Blogs

#### Web

+ **Pre-Print** [The Changing Role of RSEs over the Lifetime of Parsl](https://arxiv.org/abs/2307.11060)
+ [Helmholtz Platform for Research Software Engineering : Summer of Testing
Playlist](https://www.youtube.com/@Helmholtz_Platform_for_RSE/playlists) a series of videos on continuous testing
using C++, Julia and Python.
+ [Shifting culture to promote collaborative mind-sets about
data](https://www.insidehighered.com/opinion/career-advice/2023/07/27/shifting-culture-promote-collaborative-mind-sets-about-data).
+ [Reproducibility and research integrity: Government Response to the Committee’s Sixth report - Science, Innovation and
Technology Committee](https://publications.parliament.uk/pa/cm5803/cmselect/cmsctech/1771/report.html).
+ [Tracking the environmental impact of research computing | Software Sustainability
Institute](https://software.ac.uk/blog/2023-08-15-tracking-environmental-impact-research-computing).
+ UK Research and Innovation (UKRI) have vacancies on their [Science, Engineering and Technology Board and Strategic
Advisory
Teams](https://www.ukri.org/who-we-are/work-for-us/join-an-advisory-committee-panel-or-network/science-engineering-and-technology-board-and-strategic-advisory-teams-vacancies/)
+ **Pre-Print** [Responsible data sharing: Identifying and remedying possible re-identification of human participants](https://osf.io/preprints/metaarxiv/5m3cx/)

#### RSE Advocacy

+ [Software Sustainability Institute Fellowship Programme recruitment paused until September 2024](https://www.software.ac.uk/news/ssi-fellowship-programme-recruitment-paused-until-september-2024)

#### MATLAB

+ [repliMAT blog - One small step for MATLAB. One giant leap for
reproducibility.](https://reproduciblematlab.github.io/blog/posts/2023-07-24-one-small-step/)

#### Open Research

+ [Accelerating the Adoption of Open Science](https://indico.cern.ch/event/1254282/timetable/#20230710) - videos and
slides from a four day conference held at CERN in Zurich 2023-07-10 to 2023-07-14 in collaboration with NASA
+ The [Open Scholarship Community Sheffield (OSC Sheffield)](https://osc-international.com/osc-sheffield/) launched at
[OpenFest2023](https://www.sheffield.ac.uk/library/research/open-research/openfest2023). This aims to build a
community network of researchers to support each other in undertaking Open Research.
+ A series of factsheets from [FAIRsharing](https://fairsharing.org/) have been published.
+ [FAIRsharing in a nutshell](https://zenodo.org/record/8191958)
+ [FAIRsharing for you: funders](https://zenodo.org/record/8191958)
+ [FAIRsharing content: databases overview](https://zenodo.org/record/8186961)
+ [FAIRsharing for you: researchers](https://zenodo.org/record/8186952)
+ [FAIRsharing for you: journal publishers](https://zenodo.org/record/8186640)

#### Blogs

+ RSE team member Peter Heywood goes through in detail [Benchmarking FLAME GPU 2 on H100, A100 and V100
GPUs](https://rse.shef.ac.uk/blog/2023-08-18-benchmarking-flamegpu2-on-h100-a100-and-v100-gpus/).
+ RSE team member Neil Shephard continues his pre-commit evangelism with a blog post on [Pre-commit and R
Packaging](https://ns-rse.github.io/posts/pre-commit-r/).
+ [Teaching the tidyverse in 2023](https://www.tidyverse.org/blog/2023/08/teach-tidyverse-23/) by Mine Çetinkaya-Rundel.
+ From the rOpenSci blog [Attract Contributors with 'help wanted'
Issues](https://ropensci.org/blog/2023/09/19/help-wanted/) by Maëlle Salmon, Yanina Bellini Saibene, Steffi LaZerte.

#### Publications

+ [Habits and perceptions regarding open science by researchers from Spanish institutions | PLOS
ONE](https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0288313)
+ [Code sharing increases citations, but remains uncommon | Research
Square](https://www.researchsquare.com/article/rs-3222221/v1)

### Events

+ [NHS-R/NHS.pycom Conference 2023](http://bit.ly/nhs-r-community-conference-2023) - in-person conference Tuesday
2023-10-17.
+ [UK HPC Advisory Council Conference 2023](https://www.hpcadvisorycouncil.com/events/2023/uk-conference/index.php) in
Leicester 2023-10-18 to 2023-10-19.
+ [PackagingCon 2023](https://packaging-con.org/) a conference for packages, package tooling/ecosystem
developers/maintainers in Berlin 2023-10-26 to 2023-10-28.
+ [Nordic-RSE online unconference 2023 - Nordic RSE](https://nordic-rse.org/events/2023-online-unconference/) online
2023-10-25 to 2023-10-26.
+ [SheffledR User Group Reboot](https://www.meetup.com/sheffieldr-sheffield-r-users-group/events/296493587/rsvp/) the
local R User group sees a reboot where RSE team member Neil Shephard will be showing how to use a Quarto template to
produce slides as a website on GitHub Pages.
+ University of Sheffield Open Research Manager Jenni Adams has been busy organising the [Open Research Conversations -
autumn/winter
2023-24](https://www.sheffield.ac.uk/openresearch/events/open-research-conversations-autumnwinter-2023-24).

### Training

The new term sees the resumption of training. RSE training courses can be found [here](https://rse.shef.ac.uk/events/)
and are normally announced to our mailing list, whereas Research IT courses can be found at
[crs.shef.ac.uk](https://crs.shef.ac.uk).
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This may need changing.

Likewise, might want a brief summary of the "upcoming" courses Norbert is in the process of funding/organising, that should be appearing soon. (Arguably could have people register interest via a google form).

Maybe worth dropping him an email to clarify?

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👍 Thanks @Robadob

There are quite a lot of courses up-coming according to the events calendar. I've re-written the text, updated the link and pointed people to the calendar for details and myDevelopment for registration.

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I meant the new courses uni has funded bc of stanage, I don't think they're announced anywhere yet as they've not been developed (though they need to run loads before end of financial year, so i expect goal is to get them ready ASAP).

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If they're not announced/detailed anywhere I'll leave it for this newsletter and save it for updating next month (#711).


#### External Training

+ [The Turing Online Learning Platform](https://www.turing.ac.uk/courses) contains a number of courses, many of which
can be undertaken independently.
+ [4th OpenAIRE Open Science Train-the-Trainer
Bootcamp](https://www.openaire.eu/4th-openaire-open-science-train-the-trainer-bootcamp)
+ Health Data Research UK [Reproducible Analytical Pipelines
Webinar](https://www.hdruk.ac.uk/events/reproducible-analytical-pipelines-webinar-2/) online 2023-10-10.

<!--#### Research IT Training-->

<!--Research IT courses have adopted a hybrid approach. The team will be providing their courses both online and in -->
<!--person for the first time since March 2020. The team provides a place for beginners or advanced users to expand -->
<!--their knowledge of HPC and different programming languages. The courses are part of the Doctoral Development -->
<!--Programme. For more information please visit our training registration web page (via VPN): -->
<!--[crs.shef.ac.uk](https://crs.shef.ac.uk).-->

<!--If a course is "sold out" please join the wait list by signing up - we regularly email people to encourage those -->
<!--that can no longer attend to cancel. Those on the wait list get early notification when the courses are run -->
<!--again.-->

### Opportunities

+ The Carpentries has a [Call for Candidates for The Carpentries Board of Directors](https://carpentries.org/blog/2023/09/board-of-directors-election-announcement/).

#### Jobs

You can always check for advertised RSE and RSE-adjacent roles over at the [RSE society's vacancies
board](https://society-rse.org/careers/vacancies/).

+ [Interim IT and Computing Manager (Full-time, Fixed Term) - Job Opportunities - University of
Cambridge](https://www.jobs.cam.ac.uk/job/42717/)

### Digital Research Practice Support Community

The DRPS community is a group for people that support researchers in carrying out research in the digital age. Meetings
are held monthly, with discussions around events, training and opportunities related to the field.

You can join the google group
[here](https://groups.google.com/u/1/a/sheffield.ac.uk/g/digital-research-practice-support-community-group/about) to
stay informed.

The next meeting is scheduled for 2pm on Wednesday 9th August.

### LunchBytes

[LunchBytes](https://rse.shef.ac.uk/community/lunch-bytes/) are short talks from the research community on research
software, data, and infrastructure.

+ [Making research software more visible and reusable: Open Source Software and
FAIR4RS](https://bit.ly/open-research-conversation-lunchbytes-fair4rs) in conjunction with Open Research Conversations
we look at the FAIR principles and how they apply to research software under the [FAIR for Research Softrware (FAIR4RS)
principles](https://zenodo.org/record/6623556#.YqCJTJNBwlw).

#### LunchBytes needs YOU

LunchBytes are organised by and for the research software community at The University of Sheffield. If you'd like to
curate a session on a topic or present something, get in touch by emailing
[[email protected]](mailto:[email protected]) - Or suggest topics
[on the jamboard](https://jamboard.google.com/d/1-51cRf0pwZl8O10CnLeJGAqKcnbww-QGaYjszFK-H38/).

### Support

#### Code Clinics

Why not come to a [Code
Clinic](https://docs.google.com/forms/d/e/1FAIpQLScGXS55qjU0D0Zcz-KHOVcNTahcr3YC3H0OpoKBo3lWXWED5A/viewform)? We're keen
to help you.

Code Clinics are fortnightly supported sessions run by the RSE team and IT Services’ [Research
IT](https://www.sheffield.ac.uk/it-services/research) team. They are open to anyone at TUoS writing code for research to
get help with programming problems and general advice on best practices.

At each session, members of the RSE and/or Research IT teams will be available to review code, advise, troubleshoot, and
suggest ways to improve your computational workflows.

#### Research IT HPC Drop In

HPC Drop-In sessions are providing assistance with HPC related user issues such as challenges in scaling an application
from desktop to supercomputer. We are considering extending the number of our sessions to two or three weekly. These
interactive sessions could provide a better interface with our users than our non-interactive ticketing system. These
sessions are advertised on the [HPC mailing list](https://groups.google.com/u/1/a/sheffield.ac.uk/g/hpc).

#### Research IT Consultations

Alongside the HPC Drop-In sessions, Research IT are also running one to one consultations to solve in depth user
specific problems. These consultations can be booked via our webpage. If you are interested please visit the following
link: <https://students.sheffield.ac.uk/it-services/research>.

## Sheffield RSE Team

The Sheffield RSE Team aims to [collaborate](https://rse.shef.ac.uk/collaboration/guide/) with you to help improve your
research software.

They can provide dedicated staff to ensure that you can deliver excellent research software engineering on your research
projects.

The Sheffield RSE Team provides free [Code Clinics][CCs] (in collaboration with [IT Services][its-res-it]), plus [paid
services][rse-service] that allow us to collaborate longer term.

## Research IT

[Research IT](https://students.sheffield.ac.uk/it-services/research) directly supports research, both academic and commercial.
We provide large scale HPC systems, advice on everything from statistics to ML to data pipelines and training for both
students and staff.

Working with academics, our staff are embedded within research groups on both long and short term engagements.

[CCs]: https://rse.shef.ac.uk/support/code-clinic/
[its-res-it]: https://www.sheffield.ac.uk/it-services/research/
[rse-service]: https://rse.shef.ac.uk/collaboration/