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First draft of October 2023 newsletter #710
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--- | ||
layout: post | ||
title: Summer 2023 Newsletter | ||
editor: Robert Chisholm | ||
slug: 2023-07-21-newsletter | ||
date: 2023-07-21T00:00:00Z+0100 | ||
tags: | ||
category: | ||
link: | ||
description: | ||
type: text | ||
--- | ||
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## The University of Sheffield Research Software Engineering Community Newsletter October 2023 | ||
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Welcome to the October 2023 newsletter for the research software community at The University of Sheffield, featuring | ||
news, opportunities, events and training for you. | ||
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### News, Web & Blogs | ||
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#### Web | ||
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+ **Pre-Print** [The Changing Role of RSEs over the Lifetime of Parsl](https://arxiv.org/abs/2307.11060) | ||
+ [Helmholtz Platform for Research Software Engineering : Summer of Testing | ||
Playlist](https://www.youtube.com/@Helmholtz_Platform_for_RSE/playlists) a series of videos on continuous testing | ||
using C++, Julia and Python. | ||
+ [Shifting culture to promote collaborative mind-sets about | ||
data](https://www.insidehighered.com/opinion/career-advice/2023/07/27/shifting-culture-promote-collaborative-mind-sets-about-data). | ||
+ [Reproducibility and research integrity: Government Response to the Committee’s Sixth report - Science, Innovation and | ||
Technology Committee](https://publications.parliament.uk/pa/cm5803/cmselect/cmsctech/1771/report.html). | ||
+ [Tracking the environmental impact of research computing | Software Sustainability | ||
Institute](https://software.ac.uk/blog/2023-08-15-tracking-environmental-impact-research-computing). | ||
+ UK Research and Innovation (UKRI) have vacancies on their [Science, Engineering and Technology Board and Strategic | ||
Advisory | ||
Teams](https://www.ukri.org/who-we-are/work-for-us/join-an-advisory-committee-panel-or-network/science-engineering-and-technology-board-and-strategic-advisory-teams-vacancies/) | ||
+ **Pre-Print** [Responsible data sharing: Identifying and remedying possible re-identification of human participants](https://osf.io/preprints/metaarxiv/5m3cx/) | ||
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#### RSE Advocacy | ||
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+ [Software Sustainability Institute Fellowship Programme recruitment paused until September 2024](https://www.software.ac.uk/news/ssi-fellowship-programme-recruitment-paused-until-september-2024) | ||
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#### MATLAB | ||
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+ [repliMAT blog - One small step for MATLAB. One giant leap for | ||
reproducibility.](https://reproduciblematlab.github.io/blog/posts/2023-07-24-one-small-step/) | ||
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#### Open Research | ||
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+ [Accelerating the Adoption of Open Science](https://indico.cern.ch/event/1254282/timetable/#20230710) - videos and | ||
slides from a four day conference held at CERN in Zurich 2023-07-10 to 2023-07-14 in collaboration with NASA | ||
+ The [Open Scholarship Community Sheffield (OSC Sheffield)](https://osc-international.com/osc-sheffield/) launched at | ||
[OpenFest2023](https://www.sheffield.ac.uk/library/research/open-research/openfest2023). This aims to build a | ||
community network of researchers to support each other in undertaking Open Research. | ||
+ A series of factsheets from [FAIRsharing](https://fairsharing.org/) have been published. | ||
+ [FAIRsharing in a nutshell](https://zenodo.org/record/8191958) | ||
+ [FAIRsharing for you: funders](https://zenodo.org/record/8191958) | ||
+ [FAIRsharing content: databases overview](https://zenodo.org/record/8186961) | ||
+ [FAIRsharing for you: researchers](https://zenodo.org/record/8186952) | ||
+ [FAIRsharing for you: journal publishers](https://zenodo.org/record/8186640) | ||
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#### Blogs | ||
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+ RSE team member Peter Heywood goes through in detail [Benchmarking FLAME GPU 2 on H100, A100 and V100 | ||
GPUs](https://rse.shef.ac.uk/blog/2023-08-18-benchmarking-flamegpu2-on-h100-a100-and-v100-gpus/). | ||
+ RSE team member Neil Shephard continues his pre-commit evangelism with a blog post on [Pre-commit and R | ||
Packaging](https://ns-rse.github.io/posts/pre-commit-r/). | ||
+ [Teaching the tidyverse in 2023](https://www.tidyverse.org/blog/2023/08/teach-tidyverse-23/) by Mine Çetinkaya-Rundel. | ||
+ From the rOpenSci blog [Attract Contributors with 'help wanted' | ||
Issues](https://ropensci.org/blog/2023/09/19/help-wanted/) by Maëlle Salmon, Yanina Bellini Saibene, Steffi LaZerte. | ||
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#### Publications | ||
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+ [Habits and perceptions regarding open science by researchers from Spanish institutions | PLOS | ||
ONE](https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0288313) | ||
+ [Code sharing increases citations, but remains uncommon | Research | ||
Square](https://www.researchsquare.com/article/rs-3222221/v1) | ||
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### Events | ||
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+ [NHS-R/NHS.pycom Conference 2023](http://bit.ly/nhs-r-community-conference-2023) - in-person conference Tuesday | ||
2023-10-17. | ||
+ [UK HPC Advisory Council Conference 2023](https://www.hpcadvisorycouncil.com/events/2023/uk-conference/index.php) in | ||
Leicester 2023-10-18 to 2023-10-19. | ||
+ [PackagingCon 2023](https://packaging-con.org/) a conference for packages, package tooling/ecosystem | ||
developers/maintainers in Berlin 2023-10-26 to 2023-10-28. | ||
+ [Nordic-RSE online unconference 2023 - Nordic RSE](https://nordic-rse.org/events/2023-online-unconference/) online | ||
2023-10-25 to 2023-10-26. | ||
+ [SheffledR User Group Reboot](https://www.meetup.com/sheffieldr-sheffield-r-users-group/events/296493587/rsvp/) the | ||
local R User group sees a reboot where RSE team member Neil Shephard will be showing how to use a Quarto template to | ||
produce slides as a website on GitHub Pages. | ||
+ University of Sheffield Open Research Manager Jenni Adams has been busy organising the [Open Research Conversations - | ||
autumn/winter | ||
2023-24](https://www.sheffield.ac.uk/openresearch/events/open-research-conversations-autumnwinter-2023-24). | ||
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### Training | ||
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The new term sees the resumption of training. RSE training courses can be found [here](https://rse.shef.ac.uk/events/) | ||
and are normally announced to our mailing list, whereas Research IT courses can be found at | ||
[crs.shef.ac.uk](https://crs.shef.ac.uk). | ||
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#### External Training | ||
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+ [The Turing Online Learning Platform](https://www.turing.ac.uk/courses) contains a number of courses, many of which | ||
can be undertaken independently. | ||
+ [4th OpenAIRE Open Science Train-the-Trainer | ||
Bootcamp](https://www.openaire.eu/4th-openaire-open-science-train-the-trainer-bootcamp) | ||
+ Health Data Research UK [Reproducible Analytical Pipelines | ||
Webinar](https://www.hdruk.ac.uk/events/reproducible-analytical-pipelines-webinar-2/) online 2023-10-10. | ||
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<!--#### Research IT Training--> | ||
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<!--Research IT courses have adopted a hybrid approach. The team will be providing their courses both online and in --> | ||
<!--person for the first time since March 2020. The team provides a place for beginners or advanced users to expand --> | ||
<!--their knowledge of HPC and different programming languages. The courses are part of the Doctoral Development --> | ||
<!--Programme. For more information please visit our training registration web page (via VPN): --> | ||
<!--[crs.shef.ac.uk](https://crs.shef.ac.uk).--> | ||
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<!--If a course is "sold out" please join the wait list by signing up - we regularly email people to encourage those --> | ||
<!--that can no longer attend to cancel. Those on the wait list get early notification when the courses are run --> | ||
<!--again.--> | ||
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### Opportunities | ||
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+ The Carpentries has a [Call for Candidates for The Carpentries Board of Directors](https://carpentries.org/blog/2023/09/board-of-directors-election-announcement/). | ||
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#### Jobs | ||
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You can always check for advertised RSE and RSE-adjacent roles over at the [RSE society's vacancies | ||
board](https://society-rse.org/careers/vacancies/). | ||
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+ [Interim IT and Computing Manager (Full-time, Fixed Term) - Job Opportunities - University of | ||
Cambridge](https://www.jobs.cam.ac.uk/job/42717/) | ||
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### Digital Research Practice Support Community | ||
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The DRPS community is a group for people that support researchers in carrying out research in the digital age. Meetings | ||
are held monthly, with discussions around events, training and opportunities related to the field. | ||
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You can join the google group | ||
[here](https://groups.google.com/u/1/a/sheffield.ac.uk/g/digital-research-practice-support-community-group/about) to | ||
stay informed. | ||
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The next meeting is scheduled for 2pm on Wednesday 9th August. | ||
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### LunchBytes | ||
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[LunchBytes](https://rse.shef.ac.uk/community/lunch-bytes/) are short talks from the research community on research | ||
software, data, and infrastructure. | ||
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+ [Making research software more visible and reusable: Open Source Software and | ||
FAIR4RS](https://bit.ly/open-research-conversation-lunchbytes-fair4rs) in conjunction with Open Research Conversations | ||
we look at the FAIR principles and how they apply to research software under the [FAIR for Research Softrware (FAIR4RS) | ||
principles](https://zenodo.org/record/6623556#.YqCJTJNBwlw). | ||
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#### LunchBytes needs YOU | ||
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LunchBytes are organised by and for the research software community at The University of Sheffield. If you'd like to | ||
curate a session on a topic or present something, get in touch by emailing | ||
[[email protected]](mailto:[email protected]) - Or suggest topics | ||
[on the jamboard](https://jamboard.google.com/d/1-51cRf0pwZl8O10CnLeJGAqKcnbww-QGaYjszFK-H38/). | ||
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### Support | ||
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#### Code Clinics | ||
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Why not come to a [Code | ||
Clinic](https://docs.google.com/forms/d/e/1FAIpQLScGXS55qjU0D0Zcz-KHOVcNTahcr3YC3H0OpoKBo3lWXWED5A/viewform)? We're keen | ||
to help you. | ||
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Code Clinics are fortnightly supported sessions run by the RSE team and IT Services’ [Research | ||
IT](https://www.sheffield.ac.uk/it-services/research) team. They are open to anyone at TUoS writing code for research to | ||
get help with programming problems and general advice on best practices. | ||
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At each session, members of the RSE and/or Research IT teams will be available to review code, advise, troubleshoot, and | ||
suggest ways to improve your computational workflows. | ||
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#### Research IT HPC Drop In | ||
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HPC Drop-In sessions are providing assistance with HPC related user issues such as challenges in scaling an application | ||
from desktop to supercomputer. We are considering extending the number of our sessions to two or three weekly. These | ||
interactive sessions could provide a better interface with our users than our non-interactive ticketing system. These | ||
sessions are advertised on the [HPC mailing list](https://groups.google.com/u/1/a/sheffield.ac.uk/g/hpc). | ||
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#### Research IT Consultations | ||
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Alongside the HPC Drop-In sessions, Research IT are also running one to one consultations to solve in depth user | ||
specific problems. These consultations can be booked via our webpage. If you are interested please visit the following | ||
link: <https://students.sheffield.ac.uk/it-services/research>. | ||
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## Sheffield RSE Team | ||
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The Sheffield RSE Team aims to [collaborate](https://rse.shef.ac.uk/collaboration/guide/) with you to help improve your | ||
research software. | ||
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They can provide dedicated staff to ensure that you can deliver excellent research software engineering on your research | ||
projects. | ||
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The Sheffield RSE Team provides free [Code Clinics][CCs] (in collaboration with [IT Services][its-res-it]), plus [paid | ||
services][rse-service] that allow us to collaborate longer term. | ||
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## Research IT | ||
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[Research IT](https://students.sheffield.ac.uk/it-services/research) directly supports research, both academic and commercial. | ||
We provide large scale HPC systems, advice on everything from statistics to ML to data pipelines and training for both | ||
students and staff. | ||
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Working with academics, our staff are embedded within research groups on both long and short term engagements. | ||
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[CCs]: https://rse.shef.ac.uk/support/code-clinic/ | ||
[its-res-it]: https://www.sheffield.ac.uk/it-services/research/ | ||
[rse-service]: https://rse.shef.ac.uk/collaboration/ |
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This may need changing.
Likewise, might want a brief summary of the "upcoming" courses Norbert is in the process of funding/organising, that should be appearing soon. (Arguably could have people register interest via a google form).
Maybe worth dropping him an email to clarify?
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👍 Thanks @Robadob
There are quite a lot of courses up-coming according to the events calendar. I've re-written the text, updated the link and pointed people to the calendar for details and myDevelopment for registration.
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I meant the new courses uni has funded bc of stanage, I don't think they're announced anywhere yet as they've not been developed (though they need to run loads before end of financial year, so i expect goal is to get them ready ASAP).
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If they're not announced/detailed anywhere I'll leave it for this newsletter and save it for updating next month (#711).