Set up template for public version of app

.env.sample

@@ -1,5 +1,5 @@
 ENV=test
-DATA_VOLUME_PATH=./data/test_data
+DATA_VOLUME_PATH=./data/test_data/internal
 
 # For preprocessing
 PREPROCESS_DB_NAME=         # name of the source database

.gitignore

@@ -49,4 +49,4 @@ po/*~
 rsconnect/
 
 !dev
-.env
+*.env

public.env.sample

@@ -0,0 +1,17 @@
+ENV=test
+DATA_VOLUME_PATH=./data/test_data/public
+
+# For preprocessing
+PREPROCESS_DB_NAME=         # name of the source database
+PREPROCESS_HOST=            # host address for the source database
+PREPROCESS_PORT=            # port on which to connect to the source database
+PREPROCESS_DB_USERNAME=     # username for the source database
+PREPROCESS_DB_PASSWORD=     # password for the source database
+PREPROCESS_DB_CDM_SCHEMA=   # Schema name in the database to connect the OMOP CDM to 
+
+# Low-frequency replacement
+LOW_FREQUENCY_THRESHOLD=10
+LOW_FREQUENCY_REPLACEMENT=5
+
+# For testing
+TEST_DB_PATH=./data-raw/test_db/eunomia