Skip to content

Commit

Permalink
Update file permissions
Browse files Browse the repository at this point in the history
Former-commit-id: 20aa603
  • Loading branch information
kavanase committed Jan 29, 2024
1 parent 556afc7 commit 1dc029e
Show file tree
Hide file tree
Showing 310 changed files with 7 additions and 7 deletions.
Empty file modified CHANGELOG.rst
100755 → 100644
Empty file.
Empty file modified CITATIONS.md
100755 → 100644
Empty file.
Empty file modified LICENSE
100755 → 100644
Empty file.
Empty file modified MANIFEST.in
100755 → 100644
Empty file.
7 changes: 3 additions & 4 deletions README.md
100755 → 100644
Original file line number Diff line number Diff line change
Expand Up @@ -127,8 +127,9 @@ Automatic testing is run on the master and develop branches using Github Actions
`ShakeNBreak` has benefitted from feedback from many members of the Walsh and Scanlon research groups who have used / are using it in their work, including Adair Nicolson, Xinwei Wang, Katarina Brlec, Joe Willis, Zhenzhu Li, Jiayi Cen, Lavan Ganeshkumar, Daniel Sykes, Luisa Herring-Rodriguez, Alex Squires, Sabrine Hachmioune and Chris Savory.

## Studies using `ShakeNBreak`
We'll add papers that use `ShakeNBreak` to this list as they come out!

<!-- Wenzhen, Xinwei papers -->
- I. Mosquera-Lois et al. [_arXiv_](https://doi.org/10.48550/arXiv.2401.12127) 2024
- K. Li et al. [_ChemRxiv_](https://chemrxiv.org/engage/chemrxiv/article-details/65846b8366c1381729bc5f23) 2023
- X. Wang et al. [_Physical Review B_](https://journals.aps.org/prb/abstract/10.1103/PhysRevB.108.134102) 2023
- Y. Kumagai, S. R. Kavanagh et al [_PRX Energy_](http://dx.doi.org/10.1103/PRXEnergy.2.043002) 2023
- J. Willis, K. B. Spooner, D. O. Scanlon. [_Applied Physics Letters_](https://doi.org/10.1063/5.0170552) 2023
Expand All @@ -142,9 +143,7 @@ We'll add papers that use `ShakeNBreak` to this list as they come out!
- C. J. Krajewska et al. [_Chemical Science_](https://doi.org/10.1039/D1SC03775G) 2021 (early version)
- (News & Views): A. Mannodi-Kanakkithodi [_Nature Physics_](https://doi.org/10.1038/s41567-023-02049-9) 2023 ([Free-to-read link](https://t.co/EetpnRgjzh))


<!-- Se -->
<!-- Ke Sb2O5 -->
<!-- Oba book -->
<!-- BiOI -->
<!-- Kumagai collab paper -->
Expand Down
Empty file modified SnB_input_files/castep.param
100755 → 100644
Empty file.
Empty file modified SnB_input_files/cp2k_input.inp
100755 → 100644
Empty file.
Empty file modified SnB_input_files/default_POTCARs.yaml
100755 → 100644
Empty file.
Empty file modified SnB_input_files/example_generate_all_config.yaml
100755 → 100644
Empty file.
Empty file modified SnB_input_files/example_generate_config.yaml
100755 → 100644
Empty file.
Empty file modified SnB_input_files/incar.yaml
100755 → 100644
Empty file.
Empty file modified SnB_input_files/qe_input.yaml
100755 → 100644
Empty file.
Empty file modified docs/Analysis.rst
100755 → 100644
Empty file.
Empty file modified docs/Code_Compatibility.rst
100755 → 100644
Empty file.
Empty file modified docs/Contributing.rst
100755 → 100644
Empty file.
Empty file modified docs/Generation.rst
100755 → 100644
Empty file.
Empty file modified docs/Installation.rst
100755 → 100644
Empty file.
Empty file modified docs/Makefile
100755 → 100644
Empty file.
Empty file modified docs/ShakeNBreak_Example_Workflow.ipynb
100755 → 100644
Empty file.
Empty file modified docs/Tips.rst
100755 → 100644
Empty file.
Empty file modified docs/Tutorials.rst
100755 → 100644
Empty file.
Empty file modified docs/changelog_link.rst
100755 → 100644
Empty file.
Empty file modified docs/conf.py
100755 → 100644
Empty file.
Empty file modified docs/distortion_metadata.json
100755 → 100644
Empty file.
Empty file modified docs/docs_requirements.txt
100755 → 100644
Empty file.
Empty file modified docs/figures/Figure_joss.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
7 changes: 4 additions & 3 deletions docs/index.rst
100755 → 100644
Original file line number Diff line number Diff line change
Expand Up @@ -209,10 +209,10 @@ Automatic testing is run on the master and develop branches using Github Actions
run tests and add new tests for any new features whenever submitting pull requests.

Studies using ``ShakeNBreak``
========================

We'll add papers that use `ShakeNBreak` to this list as they come out!
=============================

- I\. Mosquera-Lois et al. `arXiv <https://doi.org/10.48550/arXiv.2401.12127>`_ 2024
- K\. Li et al. `ChemRxiv <https://chemrxiv.org/engage/chemrxiv/article-details/65846b8366c1381729bc5f23>`_ 2024
- X\. Wang et al. `Physical Review B <https://journals.aps.org/prb/abstract/10.1103/PhysRevB.108.134102>`_ 2023
- Y\. Kumagai, S. R. Kavanagh et al. `PRX Energy <http://dx.doi.org/10.1103/PRXEnergy.2.043002>`__ 2023
- J\. Willis, K. B. Spooner, D. O. Scanlon. `Applied Physics Letters <https://doi.org/10.1063/5.0170552>`__ 2023
Expand All @@ -227,6 +227,7 @@ We'll add papers that use `ShakeNBreak` to this list as they come out!
- (News & Views): A. Mannodi-Kanakkithodi `Nature Physics`_ 2023 (`Free-to-read link <https://t.co/EetpnRgjzh>`__)

.. Se
.. Xinwei, Wenzhen early 2024 papers
.. Oba book
.. BiOI
.. Kumagai collab paper
Expand Down
Empty file modified docs/make.bat
100755 → 100644
Empty file.
Empty file modified docs/modules.rst
100755 → 100644
Empty file.
Empty file modified docs/paper.bib
100755 → 100644
Empty file.
Empty file modified docs/paper.md
100755 → 100644
Empty file.
Empty file modified docs/requirements.txt
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.analysis.rst
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.bib
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.cli.rst
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.distortions.rst
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.energy_lowering_distortions.rst
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.input.rst
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.io.rst
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.plotting.rst
100755 → 100644
Empty file.
Empty file modified docs/shakenbreak.rst
100755 → 100644
Empty file.
Empty file modified docs/toc.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified docs/v_Cd_s0_0.svg
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified docs/v_Cd_s0_0_colorbar.svg
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified docs/vac_1_Cd_0.svg
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified docs/vac_1_Cd_0_colorbar.svg
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified fonts/Montserrat-Regular.ttf
100755 → 100644
Empty file.
Empty file modified pyproject.toml
100755 → 100644
Empty file.
Empty file modified setup.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/__init__.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/analysis.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/cli.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/distortions.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/energy_lowering_distortions.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/input.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/io.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/plotting.py
100755 → 100644
Empty file.
Empty file modified shakenbreak/scripts/SnB_run.sh
100755 → 100644
Empty file.
Empty file modified shakenbreak/scripts/save_vasp_files.sh
100755 → 100644
Empty file.
Empty file modified shakenbreak/shakenbreak.mplstyle
100755 → 100644
Empty file.
Empty file modified tests/__init__.py
100755 → 100644
Empty file.
Empty file modified tests/data/Ag_Sb_Cs_Te2.90_-2.json
100755 → 100644
Empty file.
Empty file modified tests/data/README
100755 → 100644
Empty file.
Empty file modified tests/data/castep/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/castep/Si2-cellopt-aniso.castep
100755 → 100644
Empty file.
Empty file modified tests/data/castep/castep_mod.param
100755 → 100644
Empty file.
Empty file modified tests/data/castep/vac_1_Cd_0/Bond_Distortion_30.0%/castep.cell
100755 → 100644
Empty file.
Empty file modified tests/data/castep/vac_1_Cd_0/Bond_Distortion_30.0%/castep.param
100755 → 100644
Empty file.
Empty file.
Empty file modified tests/data/castep/vac_1_Cd_0/Bond_Distortion_30.0%/geom.castep
100755 → 100644
Empty file.
Empty file modified tests/data/castep/vac_1_Cd_0/test_vac_1_Cd_0.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/cp2k/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/cp2k/cp2k.restart
100755 → 100644
Empty file.
Empty file modified tests/data/cp2k/cp2k_input_mod.inp
100755 → 100644
Empty file.
Empty file modified tests/data/cp2k/vac_1_Cd_0/Bond_Distortion_30.0%/cp2k_input.inp
100755 → 100644
Empty file.
Empty file.
Empty file modified tests/data/cp2k/vac_1_Cd_0/Bond_Distortion_30.0%/relax.out
100755 → 100644
Empty file.
Empty file modified tests/data/cp2k/vac_1_Cd_0/Bond_Distortion_30.0%/structure.cif
100755 → 100644
Empty file.
Empty file modified tests/data/cp2k/vac_1_Cd_0/test_vac_1_Cd_0.yaml
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/example_results/v_Cd_-1/Bond_Distortion_0.0%/CONTCAR
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/example_results/v_Cd_-1/Unperturbed/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_-1/v_Cd_-1.yaml
100755 → 100644
Empty file.
Empty file.
Empty file modified tests/data/example_results/v_Cd_-2/Rattled/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_-2/Unperturbed/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_-2/v_Cd_-2.yaml
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/Bond_Distortion_0.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/Bond_Distortion_10.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/Bond_Distortion_20.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/Bond_Distortion_30.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/Bond_Distortion_40.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/Bond_Distortion_50.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/Bond_Distortion_60.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/Unperturbed/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/example_results/v_Cd_0/v_Cd_0.yaml
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/example_results/v_Ti_0/Unperturbed/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/fhi_aims/.aims.out.swp
100755 → 100644
Empty file.
Empty file modified tests/data/fhi_aims/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/fhi_aims/POSCAR_geom
100755 → 100644
Empty file.
Empty file modified tests/data/fhi_aims/Si_opt.out
100755 → 100644
Empty file.
Empty file modified tests/data/fhi_aims/control.in
100755 → 100644
Empty file.
Empty file modified tests/data/fhi_aims/geometry.in
100755 → 100644
Empty file.
Empty file modified tests/data/fhi_aims/vac_1_Cd_0/Bond_Distortion_30.0%/aims.out
100755 → 100644
Empty file.
Empty file modified tests/data/fhi_aims/vac_1_Cd_0/Bond_Distortion_30.0%/control.in
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/fhi_aims/vac_1_Cd_0/test_vac_1_Cd_0.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/quantum_espresso/espresso_structure.cif
100755 → 100644
Empty file.
Empty file modified tests/data/quantum_espresso/qe.in
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/quantum_espresso/vac_1_Cd_0/test_vac_1_Cd_0.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/remote_baseline_plots/Cd_Te_s32c_2_displacement.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/Int_Se_1_6.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/Te_i_Td_Te2.83_+2.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/as_2_O_on_I_1.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_-1.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_-2.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_-2_only_rattled.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_0.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_0_colors.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_0_displacement.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_0_max_dist.png
100755 → 100644
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_0_notitle.png
100755 → 100644
Empty file modified tests/data/remote_baseline_plots/vac_1_Cd_0_unparsed_disp.png
100755 → 100644
Empty file modified tests/data/vasp/CdSeTe_v_Cd.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_Bulk_Conventional_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_Bulk_Primitive_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_Bulk_Supercell_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_Int_Cd_2_-60%_Distortion_NN_10_POSCAR
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_Int_Cd_2_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_V_Cd_-1_vgam_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_V_Cd_-50%_Distortion_Rattled_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_V_Cd_-50%_Distortion_Unrattled_POSCAR
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_V_Cd_-50%_Kwarged_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_V_Cd_0_30%_local_rattle_POSCAR
100755 → 100644
Empty file.
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_V_Cd_Dimer_Rattled_0pt25_POSCAR
100755 → 100644
Empty file.
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_V_Cd_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_as_1_Te_on_Cd_-2_DX_Relaxed_CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_defects_dict.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_extrinsic_defects_dict.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_sub_1_In_on_Cd_1.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_vac_1_Cd_0_stdev_0.05.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_vac_1_Cd_0_stdev_0.15.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/CdTe_vac_1_Cd_0_stdev_0.25.yaml
100755 → 100644
Empty file.
Empty file.
Empty file modified tests/data/vasp/CdTe/Int_Cd_2_+2_tailed_off_rattle_POSCAR
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/vasp/CdTe/distortion_metadata.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/doped_Te_i_dict.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/doped_V_Cd_0_dict.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/doped_defect_dict.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/fake_V_Cd_-2_from_other_charge_states.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/reduced_CdTe_defect_gen.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_-2.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-10.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-10.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-12.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-12.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-15.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-15.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-17.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-17.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-2.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-2.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-20.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-20.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-22.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-22.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-25.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-25.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-27.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-27.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-30.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-30.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-32.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-32.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-35.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-35.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-37.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-37.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-40.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-40.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-42.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-42.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-45.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-45.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-47.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-47.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-5.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-5.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-50.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-50.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-52.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-52.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-55.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-55.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-57.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-57.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-60.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-60.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-7.5%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_-7.5%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_0.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Bond_Distortion_0.0%/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Unperturbed/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/Unperturbed/POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/default_INCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/fake_vac_1_Cd_0.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vac_1_Cd_0/vac_1_Cd_0.yaml
100755 → 100644
Empty file.
Empty file.
Empty file modified tests/data/vasp/CdTe/vacancies_dist_defect_dict.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/CdTe/vacancies_dist_metadata.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/Cu_prim_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/K4MnFe2F12_POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/rTiO2_vac_2_O_0_nupdown_0.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/rTiO2_vac_2_O_0_nupdown_2.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_-10.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_-20.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_-30.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_-40.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_-50.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_-60.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_0.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_10.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_20.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_30.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_40.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_50.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Bond_Distortion_60.0%.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Dimer.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/Unperturbed.POSCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ca_s0_0/v_Ca_s0_0.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ge_s16_0/Bond_Distortion_-60.0%/OUTCAR
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/vasp/v_Ge_s16_0/Bond_Distortion_40.0%/OUTCAR
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/vasp/v_Ge_s16_0/Bond_Distortion_50.0%/OUTCAR
100755 → 100644
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file.
Empty file modified tests/data/vasp/v_Ge_s16_0/Unperturbed/OUTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_Ge_s16_0/v_Ge_s16_0.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_O_s1_0/Bond_Distortion_-50.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_O_s1_0/Bond_Distortion_-60.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_O_s1_0/distortion_metadata.json
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/v_O_s1_0/v_O_s1_0.yaml
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/vac_1_Ti_0/Bond_Distortion_-40.0%/CONTCAR
100755 → 100644
Empty file.
Empty file modified tests/data/vasp/vac_1_Ti_0/Bond_Distortion_10.0%/CONTCAR
100755 → 100644
Empty file.
Loading

0 comments on commit 1dc029e

Please sign in to comment.