An-atlas-of-infiltrated-B-lymphocytes-in-breast-cancer-revealed-by-paired-single-cell-RNA-sequencing

The scripts are used to analyze single cell RNA sequencing data in the paper "An atlas of infiltrated B-lymphocytes in breast cancer revealed by paired single-cell RNA-sequencing and antigen receptor profiling", including quality control, clustering, and BCR/TCR analyses. The scripts need modification accroding to the comments(##) in the script before processing any dataset.