Skip to content

Commit

Permalink
Update submodules
Browse files Browse the repository at this point in the history
  • Loading branch information
SamuelDegelia-NOAA committed Oct 31, 2024
1 parent a6b2aff commit d483457
Show file tree
Hide file tree
Showing 9 changed files with 9 additions and 9 deletions.
2 changes: 1 addition & 1 deletion sorc/fv3-jedi
Submodule fv3-jedi updated 327 files
2 changes: 1 addition & 1 deletion sorc/ioda
Submodule ioda updated 45 files
+2 −0 share/CMakeLists.txt
+32 −0 share/ioda/yaml/iodatest_odb_mtgirs.yaml
+0 −1 share/ioda/yaml/iodatest_odb_oceancolour.yaml
+20 −0 share/ioda/yaml/iodatest_odb_stationsnow.yaml
+18 −0 share/ioda/yaml/odb_radiance_name_map.yaml
+16 −0 share/ioda/yaml/validation/ObsSpace.yaml
+0 −1 src/CMakeLists.txt
+48 −11 src/ObsDataVector.h
+41 −8 src/ObsVector.cc
+13 −0 src/ObsVector.h
+39 −13 src/containers/FrameCols.cpp
+55 −16 src/containers/FrameCols.h
+1 −0 src/containers/FrameColsData.cpp
+53 −4 src/containers/FrameColsData.h
+69 −14 src/containers/FrameRows.cpp
+74 −6 src/containers/FrameRows.h
+7 −2 src/containers/FrameRowsData.cpp
+61 −12 src/containers/FrameRowsData.h
+25 −0 src/containers/FunctionsCols.cpp
+3 −0 src/containers/FunctionsCols.h
+0 −52 src/containers/FunctionsRows.cpp
+0 −32 src/containers/FunctionsRows.h
+8 −0 src/containers/IColsData.h
+40 −1 src/containers/IFrame.h
+9 −0 src/containers/IFrameData.h
+0 −35 src/containers/IRowsData.h
+19 −1 src/containers/IView.h
+23 −7 src/containers/ViewCols.cpp
+33 −4 src/containers/ViewCols.h
+21 −2 src/containers/ViewColsData.cpp
+34 −8 src/containers/ViewColsData.h
+66 −20 src/containers/ViewRows.cpp
+65 −5 src/containers/ViewRows.h
+27 −9 src/containers/ViewRowsData.cpp
+35 −12 src/containers/ViewRowsData.h
+15 −3 src/engines/ioda/src/ioda/Engines/ODC/DataFromSQL.cpp
+4 −0 src/engines/ioda/src/ioda/Engines/ODC/DataFromSQL.h
+2 −1 src/engines/ioda/src/ioda/Engines/ODC/ODC.cpp
+16 −17 src/engines/ioda/src/ioda/VarUtils.cpp
+4 −0 src/mains/odfDemo/CMakeLists.txt
+239 −0 src/mains/odfDemo/odfViewTest.cpp
+2 −1 src/obsspace_mod.F90
+35 −9 test/CMakeLists.txt
+44 −11 test/ioda/ObsSpaceAppend.h
+12 −0 test/ioda/ObsVector.h
2 changes: 1 addition & 1 deletion sorc/iodaconv
Submodule iodaconv updated 46 files
+5 −3 CMakeLists.txt
+12 −11 src/compo/CMakeLists.txt
+125 −65 src/compo/airnow2ioda_nc.py
+316 −0 src/compo/gcas_nc2ioda.py
+21 −18 src/compo/icartt_nc2ioda.py
+299 −0 src/compo/pandora_2ioda.py
+2 −1 src/compo/tempo_nc2ioda.py
+15 −5 src/conventional/ionosonde_ascii2ioda.py
+1 −1 src/gsi_ncdiag/CMakeLists.txt
+1 −1 src/gsi_ncdiag/gsi_ncdiag.py
+20 −9 src/gsi_varbc/satbias_upgrader.py
+1 −0 src/hdf5/CMakeLists.txt
+93 −48 src/hdf5/cloudsat_netcdf_to_ioda.py
+52 −24 src/hdf5/osw_2ioda.py
+17 −13 src/hdf5/read_cloudsat.py
+145 −0 src/hdf5/read_dpr_gpm.py
+0 −1 src/hdf5/tropics_2ioda.py
+1 −0 src/land/CMakeLists.txt
+165 −0 src/land/madis_snow2ioda.py
+143 −143 src/marine/gmao_obs2ioda.py
+4 −2 src/mrms/mrms_grib2ioda.py
+1 −1 src/pyiodaconv/CMakeLists.txt
+98 −1 test/CMakeLists.txt
+3 −0 test/testinput/GCAS_NO2_20230802.nc
+100 −0 test/testinput/Pandora57s1_BoulderCO_L2_rnvs3p1-8.txt
+20,596 −0 test/testinput/airnow_sites_epalist_20240716.csv
+84 −0 test/testinput/bufr_gpsipw.yaml
+0 −3 test/testinput/gmao-obs-20180415.nc
+3 −0 test/testinput/gmao_argo.nc
+ test/testinput/gpm_dpr_20240401-S105223-E122536.sample.hdf5
+3 −0 test/testinput/madis_2021010100.nc
+3 −0 test/testinput/obs.20240806T00Z.ipw_gnssgb.ncep.bufr
+3 −0 test/testoutput/20240401T105230_PT1M_dpr_gpm.nc
+3 −0 test/testoutput/20240806T00Z_PT1M_ipw_gnssgb_ncep.nc
+3 −0 test/testoutput/Pandora57s1_BoulderCO_L2_rnvs3p1-8.nc
+2 −2 test/testoutput/airnow_2020081306.nc
+3 −0 test/testoutput/airnow_2020081306_epalist.nc
+3 −0 test/testoutput/gmao_argo.nc
+0 −3 test/testoutput/gmao_oceanObs.nc
+3 −0 test/testoutput/ioda_GCAS_NO2_20230802.nc
+1 −1 test/testoutput/ioda_icartt_DC8_20230627_RA.nc
+1 −1 test/testoutput/ionosonde_edp_20201003T203000Z.nc4
+3 −0 test/testoutput/madis_snod_2021010100.nc
+2 −2 test/testoutput/tempo_no2_stratosphere.nc
+2 −2 test/testoutput/tempo_no2_total.nc
+2 −2 test/testoutput/tempo_no2_troposphere.nc
2 changes: 1 addition & 1 deletion sorc/mpas-jedi
Submodule mpas-jedi updated 47 files
+1 −1 graphics/conditionalVerification/utils.py
+6 −5 graphics/standalone/plot_cost_grad.py
+4 −4 graphics/standalone/plot_diag.py
+2 −4 src/mpasjedi/LinearVariableChange/Model2GeoVars/mpasjedi_lvc_model2geovars_mod.F90
+1 −1 src/mpasjedi/State/mpas_state_mod.F90
+5 −6 src/mpasjedi/VariableChange/Model2GeoVars/mpasjedi_vc_model2geovars_mod.F90
+1 −1 test/covariance/yamls/3dvar.yaml
+1 −6 test/testinput/3denvar_2stream_bumploc.yaml
+0 −5 test/testinput/3denvar_amsua_allsky.yaml
+0 −5 test/testinput/3denvar_amsua_bc.yaml
+1 −5 test/testinput/3denvar_bumploc.yaml
+1 −6 test/testinput/3denvar_dual_resolution.yaml
+1 −6 test/testinput/3dfgat.yaml
+1 −6 test/testinput/3dfgat_pseudo.yaml
+1 −6 test/testinput/3dhybrid_bumpcov_bumploc.yaml
+4 −9 test/testinput/3dvar.yaml
+1 −6 test/testinput/3dvar_bumpcov.yaml
+1 −6 test/testinput/3dvar_bumpcov_nbam.yaml
+1 −6 test/testinput/3dvar_bumpcov_ropp.yaml
+1 −6 test/testinput/3dvar_bumpcov_rttovcpp.yaml
+1 −6 test/testinput/4denvar_ID.yaml
+0 −5 test/testinput/4denvar_VarBC.yaml
+0 −5 test/testinput/4denvar_VarBC_nonpar.yaml
+1 −5 test/testinput/4denvar_bumploc.yaml
+1 −6 test/testinput/4dfgat.yaml
+1 −6 test/testinput/4dfgat_append_obs.yaml
+1 −6 test/testinput/4dhybrid_bumpcov_bumploc.yaml
+1 −1 test/testinput/converttostructuredgrid_latlon.yaml
+1 −6 test/testinput/eda_3dhybrid_1.yaml
+1 −6 test/testinput/eda_3dhybrid_2.yaml
+1 −6 test/testinput/eda_3dhybrid_3.yaml
+1 −6 test/testinput/eda_3dhybrid_4.yaml
+1 −1 test/testinput/enshofx_1.yaml
+1 −1 test/testinput/enshofx_2.yaml
+1 −1 test/testinput/enshofx_3.yaml
+1 −1 test/testinput/enshofx_4.yaml
+1 −1 test/testinput/enshofx_5.yaml
+1 −1 test/testinput/hofx3d.yaml
+1 −1 test/testinput/letkf_2dloc.yaml
+1 −1 test/testinput/letkf_3dloc.yaml
+1 −1 test/testinput/lgetkf.yaml
+1 −1 test/testinput/lgetkf_height_vloc.yaml
+21 −20 test/testinput/namelists/geovars.yaml
+1 −1 test/testinput/obsop_name_map.yaml
+3 −0 test/testinput/process_perts_spectral_no_wind.yaml
+4 −4 test/testoutput/dirac_spectral_no_wind.ref
+75 −75 test/testoutput/process_perts_spectral_no_wind.ref
2 changes: 1 addition & 1 deletion sorc/oops
Submodule oops updated 184 files
2 changes: 1 addition & 1 deletion sorc/saber
Submodule saber updated 203 files
2 changes: 1 addition & 1 deletion sorc/ufo
Submodule ufo updated 236 files
2 changes: 1 addition & 1 deletion sorc/vader
Submodule vader updated 86 files
+4 −4 src/CMakeLists.txt
+1 −1 src/mo/control2analysis_varchange.cc
+12 −12 src/mo/eval_air_density.cc
+6 −6 src/mo/eval_air_pressure.cc
+4 −3 src/mo/eval_air_pressure_levels.cc
+20 −16 src/mo/eval_air_temperature.cc
+6 −3 src/mo/eval_cloud_ice_mixing_ratio.cc
+1 −4 src/mo/eval_cloud_ice_mixing_ratio.h
+6 −3 src/mo/eval_cloud_liquid_mixing_ratio.cc
+1 −4 src/mo/eval_cloud_liquid_mixing_ratio.h
+40 −36 src/mo/eval_dry_air_density.cc
+6 −6 src/mo/eval_hydrostatic_balance.cc
+13 −12 src/mo/eval_moisture_control.cc
+11 −7 src/mo/eval_moisture_incrementing_operator.cc
+9 −3 src/mo/eval_rain_mixing_ratio.cc
+1 −4 src/mo/eval_rain_mixing_ratio.h
+12 −3 src/mo/eval_ratio.cc
+21 −17 src/mo/eval_relative_humidity.cc
+3 −3 src/mo/eval_relative_humidity.h
+6 −6 src/mo/eval_surface_pressure.cc
+9 −9 src/mo/eval_surface_temperature.cc
+14 −14 src/mo/eval_surface_wind.cc
+28 −25 src/mo/eval_total_mixing_ratio.cc
+2 −1 src/mo/eval_total_relative_humidity.cc
+16 −12 src/mo/eval_virtual_potential_temperature.cc
+180 −19 src/mo/eval_water_vapor_mixing_ratio.cc
+40 −4 src/mo/eval_water_vapor_mixing_ratio.h
+7 −5 src/mo/model2geovals_varchange.cc
+4 −4 src/mo/model2geovals_varchange.h
+9 −8 src/vader/DefaultCookbook.h
+4 −2 src/vader/recipes/AirDensityLevelsMinusOne_A.cc
+4 −2 src/vader/recipes/AirDensityLevelsMinusOne_B.cc
+4 −5 src/vader/recipes/AirPotentialTemperature_A.cc
+2 −2 src/vader/recipes/AirPotentialTemperature_B.cc
+3 −3 src/vader/recipes/AirPressureAtInterface_A.cc
+2 −2 src/vader/recipes/AirPressureAtInterface_C.cc
+4 −2 src/vader/recipes/AirPressureExtendedUpByOne_A.cc
+2 −2 src/vader/recipes/AirTemperature.h
+2 −2 src/vader/recipes/AirTemperature_A.cc
+4 −3 src/vader/recipes/AirTemperature_B.cc
+10 −6 src/vader/recipes/AirVirtualTemperature_A.cc
+4 −3 src/vader/recipes/CloudIceMixingRatio_A.cc
+4 −3 src/vader/recipes/CloudLiquidMixingRatio_A.cc
+1 −1 src/vader/recipes/DryAirDensityLevelsMinusOne.h
+4 −2 src/vader/recipes/DryAirDensityLevelsMinusOne_A.cc
+1 −4 src/vader/recipes/EastwardWindAt10m.h
+8 −5 src/vader/recipes/EastwardWindAt10m_A.cc
+1 −1 src/vader/recipes/HydrostaticExnerLevels.h
+3 −3 src/vader/recipes/HydrostaticExnerLevels_A.cc
+1 −4 src/vader/recipes/NorthwardWindAt10m.h
+8 −5 src/vader/recipes/NorthwardWindAt10m_A.cc
+4 −3 src/vader/recipes/RainMixingRatio_A.cc
+7 −6 src/vader/recipes/RelativeHumidity_A.cc
+2 −2 src/vader/recipes/SurfaceAirPressure_A.cc
+7 −7 src/vader/recipes/TotalMixingRatio_A.cc
+7 −3 src/vader/recipes/TotalRelativeHumidity_A.cc
+7 −3 src/vader/recipes/TotalWater_A.cc
+4 −3 src/vader/recipes/VirtualPotentialTemperature_A.cc
+5 −3 src/vader/recipes/VirtualPotentialTemperature_B.cc
+4 −4 src/vader/recipes/WaterVaporMixingRatioWrtMoistAirAndCondensedWater2m_A.cc
+5 −4 src/vader/recipes/WaterVaporMixingRatioWrtMoistAirAndCondensedWater_A.cc
+5 −5 src/vader/recipes/WindReductionFactorAt10m_A.cc
+2 −2 test/testdata/aero6_gauss_state_F12.nc
+2 −2 test/testdata/air_density_levels_minus_one_A.nc
+2 −2 test/testdata/air_density_levels_minus_one_B.nc
+2 −2 test/testdata/dry_air_density_levels_minus_one_A.nc
+2 −2 test/testdata/gauss_state_F12.nc
+11 −0 test/testdata/rename_part4.sh
+2 −2 test/testdata/rrfs_sd_gauss_state_F12.nc
+2 −2 test/testdata/wind_at_10m_A.nc
+1 −1 test/testinput/vader_AirDensityLevelsMinusOne_A.yaml
+1 −1 test/testinput/vader_AirDensityLevelsMinusOne_B.yaml
+1 −1 test/testinput/vader_AirTemperature_A.yaml
+2 −2 test/testinput/vader_CloudIceMixingRatio_A.yaml
+2 −2 test/testinput/vader_CloudLiquidMixingRatio_A.yaml
+3 −3 test/testinput/vader_DryAirDensityLevelsMinusOne_A.yaml
+1 −1 test/testinput/vader_HydrostaticExnerLevels_A.yaml
+2 −2 test/testinput/vader_RainMixingRatio_A.yaml
+5 −5 test/testinput/vader_TotalMixingRatio_A.yaml
+1 −1 test/testinput/vader_TotalWater_A.yaml
+1 −1 test/testinput/vader_VirtualPotentialTemperature_A.yaml
+1 −1 test/testinput/vader_VirtualPotentialTemperature_B.yaml
+2 −2 test/testinput/vader_WaterVaporMixingRatioWrtMoistAirAndCondensedWater2m_A.yaml
+3 −3 test/testinput/vader_WaterVaporMixingRatioWrtMoistAirAndCondensedWater_A.yaml
+1 −1 test/testinput/vader_uwind_at_10m_A.yaml
+1 −1 test/testinput/vader_vwind_at_10m_A.yaml

0 comments on commit d483457

Please sign in to comment.